G796884


Basic Information

Item Value
gene id G796884
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 34344607 ~ 34349297 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU906991
GCCTGTTCCACATTTTATTTATTCAGATAAAGATGAGAATTGACTCTAAGAAAGCAGACTGGCCGCTATATGTAGATGAGTGTCTTACTCTATGTGGGATGTAATGGTTGTGTTGATATTGTGAATTTGTGACACTGCTTCTTACTTGGGTTGTGGTATGAGTTGGCTCTCCAATCTGCTGCTTCACAATAAATTGTACAGCAATGGCTTCAGAGGCTTATGTTCAAAGCAGTAGAGTTTAGGGGCATGAGAGCAAATTATGACATACCTTACAAACCATAGAACATACATAACAAATATGTTGAGATTCTAAGAGAGAATAGAAGACGGTCTAAGCTTAATTTCAACTTCTTGGCAGTCAAACAAGCGACATGAACATGTCTTCCATTTTGAAGTGTCTAATAGGAAACCAGGCACAGAAACATTGGAGAAAACAACCGCTTTAAGAGGAATATTTTGCAAGCAGGGTTGATACAGTGTGATAAGACATTTTTGAAAAAACGTTCAGTTACTTTAGGTTTTAAAGAAAGATAGTCAATCTTGCAAAATACATGGAACATTTAAGCACATACAATTTTCATTGTATTGAGTTCAAGCAGCGCTTGATCTTGAACATTGAGTTATACCATTAGGACAATAATCCACTTTGTTCAAAAAGAGTTCTGCCTTTCATAAAGCCTAATACAATTCTGGTGGAATGTCTTATAATGGGGAAATCTAACATGGCGAAGTAAGGGGTCCCTTAATCAAACCTTGAAATTGTGAAAGTGATTATAGAGCAAAACGCCCAGATGCCAGTGTCACAATACAGCCTGCCTCCTTTCTGTATGAGCACACAGCAGAATTGCACTGTTAGTTAAATACAGGATTGTACTGTCTGAATTTTAAAAGCAATAGTGATGTGGGGAAGAAAATATAACACTTAGCATCACAGCATTGGTGAAAATTAACTGCCAGTTTAATAACCATACGTTAAATCTGCAATACCATGACAAATCACAAAAAAAAATGACCGTAACAAAATATGCACAACCAGCTAGGTGGAACAAAGGAATTAAGGACGATTAGAATTAACAACCCCCGCCCCCAACAGTCAGTCATTCACACACCCAAaaaaaacaactaaataaCAGCAACATGGACTCGCTACTCAATAGAACCACATTATTTTCACAAACAAAATGACAACCTGGACATTACCCTGTCGCCTCAGTGACCTGAGAGGGATAAACTAGTTGGTCAGGAACAATTCCGGCTGCTTGTCatacagaggggggaggggttgaTGGAGTGGAGGTGGATGTTTATAAGCTGTTTGTGTTTAAGAGTGTAGATAGATTAACAGTGCAATTCCATTAGTTTTCCCCTTCTccggtctctccctcatctccctggTTTTCCGATACTTACAGTCAGGTTGTCCCTTAGTAGTTGCATGATCAAAGTACTGTCTTTGTAGGAATCCTCATTTAAGGTGTCGAGTTCAGCGATGGCTTCATCAAATGCCGTCTTGGCCAAGGTGCAGGCCTTCTCAGGGTTGTTGAGGATTTCATAGTAAAAGACAGAGAAGTTGAGGGCCAGGCCGAGCCTGATGGGGTGTGTTGGCTGCATCTCCTTCTTGCTGATGTCGAAAGCATCCTGGTATGCCTGCTGGGAATTATCCACTGTGGCTTTTTTTTGCATCCCCAGCTGCTACCTCAGACAGGTATCTATAATAATCGCCTTTCATTTTCAGGTAGAACACCTTGCTCTCAGCTGCAGTGGCATTGGCAATCAGGTACTTGTCAAGAAGTCCCTGAAAGAGAAGACAAAAATTATTGAAATCAGCATACCTACCTAGAGAGAAATGTAAAAGTTATATTTCAGAGGGTGGACCACAACAGTTCTTACCAGCACATCGTTGCAGATGTCCTGCAGCTCGGTTTCAATCTTCTCCCGGTACTCCTTGGCCATGGCTTGCTTCTTCTCATTGCCCTCTGTCTTTTGCTCAATGCTGGAGATGACCCGCCAGGATGAGCGGCGTGCCCCCACAACGTTCTTGTAGGCCACCGACAGCAGGTTGCGCTCCTCATTGGAGAGCTCCCCACCCTGCTCCGTCACAGACTTCATGGCCCCAGCCATATCGTCATAGCGCTCAGCCTGCTCAGCGAGCTTGGCCTTTTGTACCAGGTCGTTCTTGTCCATTTTTCAGTAATTTTTACGGCTCTAATTCCTGCTTTTTCTCTGGACAATGCAGCCTCCGTCCTCCGTGTCTCT

Function

NR:

description
PREDICTED: 14-3-3 protein beta/alpha-A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU906991 True 2256 lncRNA 0.43 6 34344607 34349297

Neighbor

gene id symbol gene type direction distance location
LOC110531953 LOC106571856 coding downstream 181431 34133570 ~ 34163176 (-)
LOC110531949 LOC106571850 coding downstream 310117 34006952 ~ 34034490 (-)
LOC110531948 LOC106571850 coding downstream 345599 33940435 ~ 33999008 (-)
LOC110531946 LOC106571846 coding downstream 543108 33779448 ~ 33801499 (-)
LOC118966028 NA coding downstream 1001762 33341652 ~ 33342845 (-)
LOC110531153 LOC106571861 coding upstream 10681 34359904 ~ 34361763 (-)
LOC110531957 LOC106571860 coding upstream 12873 34362170 ~ 34385873 (-)
LOC110531958 LOC106571859 coding upstream 79771 34429068 ~ 34531428 (-)
LOC118966030 NA coding upstream 247243 34596540 ~ 34607133 (-)
eif2d eif2d coding upstream 268203 34617500 ~ 34636294 (-)
G796931 NA non-coding downstream 2028 34342325 ~ 34342579 (-)
G796918 NA non-coding downstream 21289 34323016 ~ 34323318 (-)
G796917 NA non-coding downstream 21669 34322395 ~ 34322938 (-)
G796821 NA non-coding downstream 156109 34188239 ~ 34188498 (-)
G796814 NA non-coding downstream 165857 34178532 ~ 34178750 (-)
G796864 NA non-coding upstream 4074 34353371 ~ 34354172 (-)
G796866 NA non-coding upstream 6856 34356153 ~ 34356791 (-)
G796937 NA non-coding upstream 41549 34390846 ~ 34391146 (-)
G796938 NA non-coding upstream 43584 34392881 ~ 34393113 (-)
G796733 rl32 other downstream 287058 34051059 ~ 34057549 (-)
G794311 LOC106577443 other downstream 2316339 32026071 ~ 32028445 (-)
G793842 NA other downstream 2682409 31661239 ~ 31662198 (-)
G793489 NA other downstream 2925634 31418455 ~ 31418973 (-)
G793472 NA other downstream 2940738 31403482 ~ 31403869 (-)
G797605 NA other upstream 520658 34869955 ~ 34875879 (-)
G798195 NA other upstream 1004922 35354219 ~ 35354675 (-)
LOC110531966 LOC106571884 other upstream 1036556 35381661 ~ 35400349 (-)
LOC118966032 LOC106571870 other upstream 1142729 35492026 ~ 35521884 (-)
LOC110531979 brpf1 other upstream 1628125 35948544 ~ 35979307 (-)

Expression


Co-expression Network