G796864



Basic Information


Item Value
gene id G796864
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 34353371 ~ 34354172 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU906964
GACTGGTGATTGCCATCAATTCCAGCATCACTaatgaaatcaaaataaattCCAGAAAATAGCATTTATAAATCTATATTATTAGAGAATGACTGACTGTTAGAGGAATTTTGATTCCTatatgttcattaaccaattcaattaaaaattctaagaatttgtaagatccttatttgcataaaatggacagagaccagcctTAAAAGTAATCAGTAGCATTTATTTCCGAGAGCTCTGCTCTTAATCACATGTTCATTAGGTTTTATATCACACATAGCGTCATAGCTTTTaatatgtgtcacgttctgaccatcgttcgtgtgtgttttcattgttttagtgttggtcaggacgtgagctgggtgggcattctatgttggatgtcttgtttgtctattgctatgtctggcctgatatggttctcaatcagaggcaggtgttagtcattgtctctgattgggaaccatatttaggtagcctgggtttcactgtgtgtttgtgggtgattgttcctgtctctgtgttttgcaccagatagggctgtttttggttttccacatttattgttttgtagtgttcgtgttttttcgttttgtcattaaacatgaatcaaagaaaccacgctgcattttggtccgcctctacttcacccaaAGGAAACCGTTACAATATGTCCCTCCTCTTCTTGGAcattgtctctcttcctcttggaCAATGACTTAGCTACTTTTCAATGCAATTCCAACACACACATATTGTTTCTTATGTTACCACATGTTACACAATCTATTGCAAGTCCTAC

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU906964 True 802 lncRNA 0.37 1 34353371 34354172

Neighbor


gene id symbol gene type direction distance location
LOC110531953 LOC106571856 coding downstream 190195 34133570 ~ 34163176 (-)
LOC110531949 LOC106571850 coding downstream 318881 34006952 ~ 34034490 (-)
LOC110531948 LOC106571850 coding downstream 354363 33940435 ~ 33999008 (-)
LOC110531946 LOC106571846 coding downstream 551872 33779448 ~ 33801499 (-)
LOC118966028 NA coding downstream 1010526 33341652 ~ 33342845 (-)
LOC110531153 LOC106571861 coding upstream 5806 34359904 ~ 34361763 (-)
LOC110531957 LOC106571860 coding upstream 7998 34362170 ~ 34385873 (-)
LOC110531958 LOC106571859 coding upstream 74896 34429068 ~ 34531428 (-)
LOC118966030 NA coding upstream 242368 34596540 ~ 34607133 (-)
eif2d eif2d coding upstream 263328 34617500 ~ 34636294 (-)
G796884 NA non-coding downstream 4074 34344607 ~ 34349297 (-)
G796931 NA non-coding downstream 10792 34342325 ~ 34342579 (-)
G796918 NA non-coding downstream 30053 34323016 ~ 34323318 (-)
G796917 NA non-coding downstream 30433 34322395 ~ 34322938 (-)
G796821 NA non-coding downstream 164873 34188239 ~ 34188498 (-)
G796866 NA non-coding upstream 1981 34356153 ~ 34356791 (-)
G796937 NA non-coding upstream 36674 34390846 ~ 34391146 (-)
G796938 NA non-coding upstream 38709 34392881 ~ 34393113 (-)
G796939 NA non-coding upstream 40804 34394976 ~ 34395176 (-)
G796733 rl32 other downstream 295822 34051059 ~ 34057549 (-)
G794311 LOC106577443 other downstream 2325103 32026071 ~ 32028445 (-)
G793842 NA other downstream 2691173 31661239 ~ 31662198 (-)
G793489 NA other downstream 2934398 31418455 ~ 31418973 (-)
G793472 NA other downstream 2949502 31403482 ~ 31403869 (-)
G797605 NA other upstream 515783 34869955 ~ 34875879 (-)
G798195 NA other upstream 1000047 35354219 ~ 35354675 (-)
LOC110531966 LOC106571884 other upstream 1031681 35381661 ~ 35400349 (-)
LOC118966032 LOC106571870 other upstream 1137854 35492026 ~ 35521884 (-)
LOC110531979 brpf1 other upstream 1623250 35948544 ~ 35979307 (-)

Expression



Co-expression Network