G796638


Basic Information

Item Value
gene id G796638
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 34397995 ~ 34398216 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU906710
tatagccccgctgttgttatttactgctgctctttaattatttgttattcttatctcttacttttttgggggggattttcttaaaactgcattgttggttaagggcctgtaagtaatcatttcactgtaaggtgttgtattcggcgcatgtgacaaataacatttgaattgattacccccaagccataagcctTCTGAACTGCTAATCAAGtggctaccctg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU906710 True 222 lncRNA 0.39 1 34397995 34398216

Neighbor

gene id symbol gene type direction distance location
LOC118966029 NA coding upstream 5033 34385884 ~ 34392962 (+)
LOC110531955 143b2 coding upstream 48698 34344355 ~ 34349297 (+)
LOC110531954 LOC106566658 coding upstream 99730 34281341 ~ 34298265 (+)
LOC110531951 LOC106571855 coding upstream 269124 34058069 ~ 34128871 (+)
rl32 rl32 coding upstream 340425 34052296 ~ 34057570 (+)
LOC110531960 NA coding downstream 212074 34610290 ~ 34612491 (+)
LOC110531961 LOC106571864 coding downstream 244703 34642919 ~ 34682784 (+)
LOC110531155 LOC106571865 coding downstream 547924 34946140 ~ 35104382 (+)
LOC110531964 LOC106571867 coding downstream 817655 35215871 ~ 35360678 (+)
LOC110531967 NA coding downstream 1001463 35399679 ~ 35403549 (+)
G796636 NA non-coding upstream 2177 34395500 ~ 34395818 (+)
G796629 LOC106571860 non-coding upstream 30941 34366007 ~ 34367054 (+)
G796623 NA non-coding upstream 37904 34359899 ~ 34360091 (+)
G796617 NA non-coding upstream 55063 34342706 ~ 34342932 (+)
G796604 NA non-coding upstream 71588 34326104 ~ 34326407 (+)
G796622 NA non-coding downstream 25760 34423976 ~ 34426889 (+)
G796626 NA non-coding downstream 30298 34428514 ~ 34432568 (+)
G797034 NA non-coding downstream 139917 34538133 ~ 34538560 (+)
G797039 NA non-coding downstream 145555 34543771 ~ 34544015 (+)
G797041 NA non-coding downstream 145921 34544137 ~ 34544589 (+)
G796495 LOC106613263 other upstream 276255 34121422 ~ 34121740 (+)
G794886 LOC106577459 other upstream 1810607 32583606 ~ 32587388 (+)
G794893 NA other upstream 1895246 32502396 ~ 32502749 (+)
G794892 NA other upstream 1895640 32501847 ~ 32502355 (+)
zgc:112271 bola2 other upstream 2273144 32122682 ~ 32124851 (+)
G797056 NA other downstream 157715 34555931 ~ 34556622 (+)
G797932 pphln other downstream 966772 35364988 ~ 35372148 (+)
G799053 NA other downstream 1914913 36313129 ~ 36316805 (+)
G799578 LOC106571900 other downstream 2636202 37034418 ~ 37035918 (+)
G799858 LOC106571908 other downstream 3169029 37567245 ~ 37570411 (+)

Expression


Co-expression Network