G796622


Basic Information

Item Value
gene id G796622
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 34423976 ~ 34426889 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU906692
TTCGTTTATTGCATTTTGTACAGACAAATCTATAAAATGGTTTGAGGAAACCATTAACCATTGTTGATGTATAAGCCTTTGACATGGTAAAACAACATGGTAAAACAACTGTTTATATATCCTTATTGAACACAATAGATAATACATATGTCTATATCTGTAAAATATTCAACTTGCATTGACACACAAATTAAACATCTAAGTTCTACTTTGATAGTTATTGATGTATTTACAGATGATATGTCTTTATCCCTTCCTTACAGGTACATACACCGtcatctctaacacacacacacacacacacacacacacacacacacacaccactacattTTTACACTACATCATCACTTTTGTTGCTAGGAGAGTGAACATAAAATTGTGAACACAAAACACCTACTAATCAATATAGTTATCTTTAGATCTACATCAAGTTGTACCTTTAAAAATGTGTTACAATGCTCCTATGGaccaagtataaatacagtatcatAAGTGAAGATTTAGAAACACTAgttcttgttttgtttttcttgCTCGCATTAAGTGCACACACTTCTCGAGATGATGAAGGAATCATGAGGGTTGCACAAAAATTCTACCTTCTAAAAAAGGAGGCTTATTCAACATTAATACAATGTGTTGAGGTTTACTTTACTGTCATGAAAACGACACACCTACATGCATATACTAGGTTCTAAAGTCTGAGGGAACCAGAATACTGAACACACAGTAGTGCATTCTCAGTAAAAGCTACCAAATCCCACTCACACTATGTATCATCCTCAGTGAAAACAACTAAAAAGTTCCTTGCTTAATCAAGAATCGGTCTGTATGGAAAACAATTGCTATTTTAGAAGAGTATGGGGTGGTTGTGCAGAACAGCAGTTGGAATTAGTACATAAAATGGGAGCATGGGGTATATTTCCAATGACACCCCATTACAAATATAGTGCACACATTTTGAACAAGTCCAAATATGCACATAATTGCAAAtaaagggtgtcatttgagacacagaTATGGAGGAACGTTCTCTAAAAATAATTATGTGTCTAAATTTCCTTGGACTGAATAGCCCTTCAAATGTTATGATTGATTTAAGTTTTATTTCCCTTGTGACTTTAATGATTACACTACACTGGAAGCAGCTGATGTATGCAACTTAACAtcattgttttggggggggggggcaaatgtgTTGTAGTTAAATAATTgcataataatacattttcaatctAAATCAACATGTATAAAATATGCTCAGTAGGACCATTGCATTTATTTGACCCTGTGATTAGTTTCACACAGTTAATGAAATACTTGTGGCCAAATTCTTTATCgaaattgtaaaataaataaatgaatattaCATTGCAGAAACAAACTGTAGTATTCACTGAGtgaacaaaatattaagaacacctgctctttccatgacatagactgaccaggtgaatccaggtgaaagctatgatcccttggtgatttcacttcaatcagtgtagatgaaggagaggacacAGGCTAAagtatgatttttaagccttaggacaattgagacatggattgtgtatgtgtgccactcagtgggtgaatggacaagacaaaatatttaagtgcctttgaacagggtatggtagaaggtACCAGGCACACcgttttgtgtcaagaactgcaatgctgctgggtttatCAAGCTAAACAGTTTCCTGTGTCtttcaaaaatggtccaccaccaaaaggacatccagctaacttgacataactgtgggaagcattggtgtcaaTGTGAGCCAGCATCCTTtttggaacactttcgacaccttgtagaatctatgccctGCCGAATAttcttcatgttttgtacactcagtgcacaTTACTTGCATGCATTGAACAAATCACAGTTATTCACATTTGTGCACACATGCGCTAaaactatcacagtgcaatgCCTGTATCTGCTTTGGACTGACACAAATAGCCTCGCAGCAATATAACATGTTGGATTCTACATTAATTAAGCGGTTGTCTAATTAAATTGGTCAAGTTATTTTACAGGGTTGTAAACAGAAGTGCATTCCTGAATAACACTTTCATATCTCATAGTTTCAATGTAGTCGGCAAGGCAAGGTCCAATGTAACATGGTAAGAATACATGGATTCGAGAGCCCTTTTCACACCCTGTTAAAAAATGGATGTAAATTATCTGACATCTTTTTTTTGCATCTAATGTATATTGGGACATGATACTTTGGAAACACCTGAAGGATGGCAGCTTTACTGCAACAATTCTGTCACTGAAATCCCTCTCACTTCTAGAGATCGAGTCATCAAACATGGGAATGTGATACCATTCTGTAAAGGTCTCTCTGACCGCTGCCAAAGGTGGTTGTCTTTGATAATATTATTAACTACCACAGTCACACTGCTGGTGGATCAGTAGATTGGTAGGTTATAGGGGAAATCTTATGTGTCTTTAGAAACCACATATCTAAGAGCCATGCTGTAGCCAAACATACACATTATCTGCACAACATACATCCATGTACCAACGCACAGTCATTTTCCAACCATAGATATTTAAGCTCTATAGTTCTATGGCTCCAGCACTTGCCATCTCATGTACCCAATAACCCCACGCACAAAAAATGGACGGATCTACTTGATTCAGAAGAATGCAGTAATTTAAACATCGTCCTCATGCAATAACAGTAGGCTCATGAGTGTACTCGCAAGGCCGGACAACATTTTTCGTCCATGTCAAACTGTTGATATGGGGATGGACACAGCTGAACTCCTATTCTGACAAAATATCAATTTCcaataaatacagtggggcaaaaaagtatttagtcagccaccaattgtgcaagttctcccac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU906692 True 2888 lncRNA 0.37 2 34423976 34426889

Neighbor

gene id symbol gene type direction distance location
LOC118966029 NA coding upstream 31014 34385884 ~ 34392962 (+)
LOC110531955 143b2 coding upstream 74679 34344355 ~ 34349297 (+)
LOC110531954 LOC106566658 coding upstream 125711 34281341 ~ 34298265 (+)
LOC110531951 LOC106571855 coding upstream 295105 34058069 ~ 34128871 (+)
rl32 rl32 coding upstream 366406 34052296 ~ 34057570 (+)
LOC110531960 NA coding downstream 183401 34610290 ~ 34612491 (+)
LOC110531961 LOC106571864 coding downstream 216030 34642919 ~ 34682784 (+)
LOC110531155 LOC106571865 coding downstream 519251 34946140 ~ 35104382 (+)
LOC110531964 LOC106571867 coding downstream 788982 35215871 ~ 35360678 (+)
LOC110531967 NA coding downstream 972790 35399679 ~ 35403549 (+)
G796638 NA non-coding upstream 25760 34397995 ~ 34398216 (+)
G796636 NA non-coding upstream 28158 34395500 ~ 34395818 (+)
G796629 LOC106571860 non-coding upstream 56922 34366007 ~ 34367054 (+)
G796623 NA non-coding upstream 63885 34359899 ~ 34360091 (+)
G796617 NA non-coding upstream 81044 34342706 ~ 34342932 (+)
G796626 NA non-coding downstream 1625 34428514 ~ 34432568 (+)
G797034 NA non-coding downstream 111244 34538133 ~ 34538560 (+)
G797039 NA non-coding downstream 116882 34543771 ~ 34544015 (+)
G797041 NA non-coding downstream 117248 34544137 ~ 34544589 (+)
G797045 NA non-coding downstream 123957 34550846 ~ 34551202 (+)
G796495 LOC106613263 other upstream 302236 34121422 ~ 34121740 (+)
G794886 LOC106577459 other upstream 1836588 32583606 ~ 32587388 (+)
G794893 NA other upstream 1921227 32502396 ~ 32502749 (+)
G794892 NA other upstream 1921621 32501847 ~ 32502355 (+)
zgc:112271 bola2 other upstream 2299125 32122682 ~ 32124851 (+)
G797056 NA other downstream 129042 34555931 ~ 34556622 (+)
G797932 pphln other downstream 938099 35364988 ~ 35372148 (+)
G799053 NA other downstream 1886240 36313129 ~ 36316805 (+)
G799578 LOC106571900 other downstream 2607529 37034418 ~ 37035918 (+)
G799858 LOC106571908 other downstream 3140356 37567245 ~ 37570411 (+)

Expression


Co-expression Network