G796626


Basic Information

Item Value
gene id G796626
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 34428514 ~ 34432568 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU906696
tattgaatatctacataggtgtacagaggtgtacagaggcccattatcagcaaccatcactcctgtgtttcaatggcacatagtgttagctaatccaaatttATCATTTtaataaaacccttttgtaattatgttagcacagcgcaaaactgttgtcctgactaaagaagcaataaaacggtccttctttagactagtttagaatctggagcatcagcatttgtgggttcgattacagaatCAAAGTGGCCAGAAACAagtaactttcttctgaaacttgtcagtctattcttcttctgagaaatgaatgctattccatgtgagaaattgccaagaaacagaAGTTCTCGTACAGTGCTGTGTACTACTATCTTCACAGAATAGagcaaacgggctctaaccagaatagaaagaggagtgggaggctccggtgcacaactgagcaagaggacaagtacattagagtgtctggaatgatggttgctgataatgggccgctgtatgcctatgtagatactccataaaaaatcagccgtttccagctacaatagtcatttacaacattaacaatgtctacactgtatttagatcaattttatgttattttaatggacaaaaaaatgtgaatttctttcaaaaacaaagacatttcttagtgaccccaaacttttgaacagcagTATGTTTTAGGTTTACAGTAGGTTTGTATTGCATATATACCAGAGTTTTAACACTCAAATCATAATCCACAGCTCCAAATCTCCATATCTTTTCATGTTTTCTGTAGTTAAATGATGACTGAGGCCGAACATATTGACTCAATTACTAGTTTCCCTAGGCAAACAGGTTGCCTCCCACAATGTAAACAATGTTCCAGCTCTTGCCCTAGGTCTGGGATATCTGAGACATATCAACTACCTATTTTGAACTCAAAAGATAAACTTTGGACAATTTTCTTCACCCATTAATTTATCAACAAAAAAGTGAGAAGAAAAGTGACACAACTGTGAGCTACGTGTCTTGTCCTCAATGACAACTAACCAACTCCTGTCTAAAAGGATATATgcaactactgttacaaacaccaTGCCAACAGgaatataaaaaaatacattgttttCAACCATCAACTTTTAAACAAGTCATATCATATTCATATGTCCAGTTACTGTATATATGTtatagtattttttattttacttcaaTACTATTATAGATTGTATAGTTAAATATTTCCAAGATTATATTATTTTGTTTTTCTGTAGTATTTGTGTGCCACGTAAAAAGTGTGCTGACTGAGGATAACTATCTACCACTATCTAACCCCAAACCTCATCACCTCTCACTCAGCTTAGAGCTGTCAACAAACACGGAGTGTCTTACTGGTATCTATGGGACCAGTCAAACACCTAAGTAGGTCTGTCCTCTTACTGATTTCAgcatattttaaaatatatttgggTAACAACCGAATATTTAATAATATCTCAAATAAACTCCATGAAGGattgtatgtatatattttcatCTGCCCTTAGACCTGCCTTTCAATAACAAGTTCAAAATGTTGTTTTGTGGCTACATTTTCTCCAACTAAACAATGCTCAGTGGAGATGTTGATTGACTAATGTCAGCTATGATTTTTTTTCAGATCTTTTCACAAAGAAAACAGCGTCATGTCCAGGTCAATAACTTCATGAACTATGTGATTTGTTGGAGCAAACTGTAGCTGACTGTTGAACCTCAAGGACAGTGTTGAAAACCACTGACTAGTGTCAAACATCCCTGCCTTGCTACCCAAGTAACTCAAACCCTGTATACCCTTCCTAGTACCCAATCTGATTAATAGACTTCTTAAATTTTTATTTTTGGTTCAATATTTACACATGAATCAGAATAGCAGCTTTAATTGTTTTTAGAACATCTATAATATGTCCTAATATGTTAGATTAAGAATATCCTTCACAGAATACAGTGTTCATCACAcacaaaatatattgtttttacgTAAACTATTCAGTAAATTGAATTAAATCATTTTCTTCCGAAAACAATATCATACAAATGTATATCATATACCCTATATTTCTATCACGTGTTCAACAGTGCCATCCAGTGCACAGAAACTAACATGTTAAATACTTGCAAATATGAGGTCGACCTGTATGTACATATATCTGTATAATATTTGCTTACAAAAATAATGAATATGATTCATGTATTATTCCAGGGTAGATTCTTTAGACATACCCTTGTAAATATGCAGAACATAGGGATTCACAGTCATATTATATTTCGCAAATAAATAGCTGTGCCACACTGACAATAAATCGTTTCTTCCCATTCTAGTCCAAGGTTGTGAATATTTGCGCTGGCTTCAAAAATATCCATTCAAACCAGTTGTAATTTCACTGCTAATTTCCATCTAAAGCATAGTTTGTTCATTCACTACACAGTTTTGCCTTTGTACTAAAAATAGGTTTGTATCAAAAAGTTATTTATTGTCCTATGGCACAATTTGTATATTTGTATTTGGCAAGAATTGTAGAATTCACATTTCTAGACTGGAATTAGTGTAAACCAAATGATGACAAAGTAAAACAGAGGTATTTACTAAAATATATCAGTGTATCACAAACATTATATGTTTATGAGTGTCTCTAAATTAGCAATTTACATGTTCTAATGTAGACTACATGGTAATATATTAAAATTGTTGCCGTTTGATAATATAGTTTCAAACACATGGACTTTTGTTTTAGATTATAACACAGTAGTTTCTTGACATCCATATCTACTTTATATCAATACATTTCAGGGTTTCTCCTTACAGTTGTATAACTGTAATAACAATAGTTTATGCCACCTAAAAGTCTTGTCAGCACTAGTCACTGATCAGGAGGAGCATCAGGTGCAGCTGGTAATAGTATGTATTAAATGATAGGACAAAGCACACTATTTACAGTAATCAACACCAACCATCAGAATTCAGTGAGTTCAATGAGAAATGTAATCCATTCAATTCATTGATTACATTTCAACTCCCATCCTGACAACAGCATCCTAGTAGCAGTTTGCCTGTCTCCTCCACACGTCACTGTGTGCTGTGCCTATGCATGCAgttatccttccttccttcaaatTGATATAGACTGTGCTGCTGCCCAGGATTCGTCAACTGACCTTGTCCCCAAGGTGAAAATCGATAGGAAGACATGCTGATGATGATTGATGAATTCTCAACCCATCCCCTTCCCTCAACACATCATATCGTACATTACATTAAAACAACTAacgcacaacaacaaaaagagaAAAAGATATGAAGTGTATCCTCTAAACACTGGAACAGATTAATAAATAAAAGTAAGAAATAAAATAGACCAGCAATGAGAAGATATCAATCCCTCTCTTGCAAGTAACCCACATCCctacaaaaagaagaagaaaagcaACAATATTGACAGACAGGTAGaaaaaaacacaaggacaaacaGAAAAAAGACATTGGCGCTGCCAAACAGAAATTACTTTTAGTTTGGGGAATAATTTGTCTTTGGGATATGTCCACTCCTCAGTATAAGGAGAAACTCATGTGCCATTTGGCATCTAGTGATCTGATAGCCATAAAATAACAGGTTGATGCCACAGCTTTCTAGATGATGGGAGGAGTGACTGATAGTAAAAGAGAATTCAGTGAGCTGATatgttatgagtgtgtgtgtgtgtgtgtctggggaggGGTTAGTGGGATGTGAGGGATGTGTAGGGGGAATGGAAAAATGTAAAAGTGTAGGGGGAATAGAAGCAGGGGCCATAAACCATTAAGATGCTAGGTGAGTGGGTGGTGGGGGGGTTGATGTTTTGATTTGAGGTTGTTTTCTCAGGAGTAGATGGTGATGACCTCACGTCCACCCCCACGTACTAGGAGGACCCGGTTGAGACCCTCGGTGAGGACCTCGAGGAACT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU906696 True 3969 lncRNA 0.36 3 34428514 34432568

Neighbor

gene id symbol gene type direction distance location
LOC118966029 NA coding upstream 35552 34385884 ~ 34392962 (+)
LOC110531955 143b2 coding upstream 79217 34344355 ~ 34349297 (+)
LOC110531954 LOC106566658 coding upstream 130249 34281341 ~ 34298265 (+)
LOC110531951 LOC106571855 coding upstream 299643 34058069 ~ 34128871 (+)
rl32 rl32 coding upstream 370944 34052296 ~ 34057570 (+)
LOC110531960 NA coding downstream 177722 34610290 ~ 34612491 (+)
LOC110531961 LOC106571864 coding downstream 210351 34642919 ~ 34682784 (+)
LOC110531155 LOC106571865 coding downstream 513572 34946140 ~ 35104382 (+)
LOC110531964 LOC106571867 coding downstream 783303 35215871 ~ 35360678 (+)
LOC110531967 NA coding downstream 967111 35399679 ~ 35403549 (+)
G796622 NA non-coding upstream 1625 34423976 ~ 34426889 (+)
G796638 NA non-coding upstream 30298 34397995 ~ 34398216 (+)
G796636 NA non-coding upstream 32696 34395500 ~ 34395818 (+)
G796629 LOC106571860 non-coding upstream 61460 34366007 ~ 34367054 (+)
G796623 NA non-coding upstream 68423 34359899 ~ 34360091 (+)
G797034 NA non-coding downstream 105565 34538133 ~ 34538560 (+)
G797039 NA non-coding downstream 111203 34543771 ~ 34544015 (+)
G797041 NA non-coding downstream 111569 34544137 ~ 34544589 (+)
G797045 NA non-coding downstream 118278 34550846 ~ 34551202 (+)
G797057 NA non-coding downstream 127821 34560389 ~ 34560767 (+)
G796495 LOC106613263 other upstream 306774 34121422 ~ 34121740 (+)
G794886 LOC106577459 other upstream 1841126 32583606 ~ 32587388 (+)
G794893 NA other upstream 1925765 32502396 ~ 32502749 (+)
G794892 NA other upstream 1926159 32501847 ~ 32502355 (+)
zgc:112271 bola2 other upstream 2303663 32122682 ~ 32124851 (+)
G797056 NA other downstream 123363 34555931 ~ 34556622 (+)
G797932 pphln other downstream 932420 35364988 ~ 35372148 (+)
G799053 NA other downstream 1880561 36313129 ~ 36316805 (+)
G799578 LOC106571900 other downstream 2601850 37034418 ~ 37035918 (+)
G799858 LOC106571908 other downstream 3134677 37567245 ~ 37570411 (+)

Expression


Co-expression Network