G796960


Basic Information

Item Value
gene id G796960
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 34513772 ~ 34515006 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU907067
AATATTCCGTCtttatcaacaacaaaaatgcaTTGCACAGCGTTTGAAGTAATGTGGTATTCTGCATGCTTAATGTAAAgtaccacaggaggaggcaggtagctggttCCAGGAAAACAAAGCTCAGAAGAGAAGTgtgtcaaaaacaaacaatacctcacaaagatGGGGTGCCAAGAACGGAACTAAatagtgtgataatgacatacaggtgtgtgaacaggtgatcagaatttgggtgattgggatctggagagtgcgctgcgttcaggggatctatgtgtttatttatttatttcacctttatttaaccaggtacgccagttctcatttacaactgcgacctggccaagataaagcaaagcagtgcaacaaaaacaacacagagttacacatgaaaaaacatacagtcaataacacaaaagaaaagaaaaatagaaaaatatatgcacagtgtgtgcaaatgtagaaaagtagggaggtgaggcaataaataggccctagaggtgaaaataattacaatttagcattaacactgaagtgatagatgtgcataTGATGAATGTGCAagcagagatactggggtgcaaaagagcaagagggtaagtaataatatggggatgaggtagttgggtgtgctgtttacagattggctgtacAGGTACCACGATCGGTaggctgctcagacagctgatgcttaaagttagggagggagatataagactccagcttcagagatttttgcaattcgttccagtcattggcagcagaaaactggaaggaaaggcggccaaaggaagtgtaagctttggggatgaccagtgcaatatacctgttggagcgcgtgctacgggtgggtgttgctatggtgaccagtgagctaaggcggggctttacctaacaacacttatagatgacctggatccagtgggtttggcaacggatatgtagtgagggccagcaaaaaagagcatacaggtcgcattggtgggtagtatatggggctttggtgataaaacagatggcactgtgatagac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU907067 True 1038 lncRNA 0.43 2 34513772 34515006

Neighbor

gene id symbol gene type direction distance location
LOC110531957 LOC106571860 coding downstream 127899 34362170 ~ 34385873 (-)
LOC110531153 LOC106571861 coding downstream 152009 34359904 ~ 34361763 (-)
LOC110531953 LOC106571856 coding downstream 350596 34133570 ~ 34163176 (-)
LOC110531949 LOC106571850 coding downstream 479282 34006952 ~ 34034490 (-)
LOC110531948 LOC106571850 coding downstream 514764 33940435 ~ 33999008 (-)
LOC118966030 NA coding upstream 81534 34596540 ~ 34607133 (-)
eif2d eif2d coding upstream 102494 34617500 ~ 34636294 (-)
LOC110533011 LOC106571887 coding upstream 200734 34715740 ~ 34721316 (-)
LOC110531962 LOC106571888 coding upstream 214328 34729334 ~ 34802834 (-)
LOC110531965 pphln coding upstream 849046 35364052 ~ 35372459 (-)
G796855 NA non-coding downstream 86887 34423962 ~ 34426885 (-)
G796951 NA non-coding downstream 104192 34409236 ~ 34409580 (-)
G796950 NA non-coding downstream 104789 34408782 ~ 34408983 (-)
G796948 NA non-coding downstream 106391 34407040 ~ 34407381 (-)
G796940 NA non-coding downstream 117649 34395667 ~ 34396123 (-)
G797042 NA non-coding upstream 29075 34544081 ~ 34544586 (-)
G797070 NA non-coding upstream 50755 34565761 ~ 34570056 (-)
G797071 NA non-coding upstream 55149 34570155 ~ 34570811 (-)
G797075 NA non-coding upstream 57507 34572513 ~ 34572849 (-)
G797081 NA non-coding upstream 61583 34576589 ~ 34577263 (-)
G796733 rl32 other downstream 456223 34051059 ~ 34057549 (-)
G794311 LOC106577443 other downstream 2485504 32026071 ~ 32028445 (-)
G793842 NA other downstream 2851574 31661239 ~ 31662198 (-)
G793489 NA other downstream 3094799 31418455 ~ 31418973 (-)
G793472 NA other downstream 3109903 31403482 ~ 31403869 (-)
G797605 NA other upstream 354949 34869955 ~ 34875879 (-)
G798195 NA other upstream 839213 35354219 ~ 35354675 (-)
LOC110531966 LOC106571884 other upstream 870847 35381661 ~ 35400349 (-)
LOC118966032 LOC106571870 other upstream 977020 35492026 ~ 35521884 (-)
LOC110531979 brpf1 other upstream 1462416 35948544 ~ 35979307 (-)

Expression


Co-expression Network