G797045


Basic Information

Item Value
gene id G797045
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 34550846 ~ 34551202 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU907155
GCACTCTCCCTTCTCTTACTCCAAGCTCAGGCTTCTACTTGCTTACTTGAGACATGCTAAATCATATCCAGCATGACAGAACCTGATATGGCTAAATTGCTCTTGTAAAACTGAGCAAATGAAGATGAATTCAAACCCCACGGGATGTTGTTCAGTACAATTGATCATGGCTTTTTTTCCTATTGCTTATTCATCCTTTCTACACTCCTATAGATAACAGGACCACCAATTCAGTGATACACTGTCTCATCCAAAGAAGACAACAATCTACTCTTTACCAGGACTGCCTCAAttcaatatacactacatgaccagaagtatgtggacacttgcttgtcgaacgtctcattccaaaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU907155 True 357 lncRNA 0.40 1 34550846 34551202

Neighbor

gene id symbol gene type direction distance location
LOC118966029 NA coding upstream 157884 34385884 ~ 34392962 (+)
LOC110531955 143b2 coding upstream 201549 34344355 ~ 34349297 (+)
LOC110531954 LOC106566658 coding upstream 252581 34281341 ~ 34298265 (+)
LOC110531951 LOC106571855 coding upstream 421975 34058069 ~ 34128871 (+)
rl32 rl32 coding upstream 493276 34052296 ~ 34057570 (+)
LOC110531960 NA coding downstream 59088 34610290 ~ 34612491 (+)
LOC110531961 LOC106571864 coding downstream 91717 34642919 ~ 34682784 (+)
LOC110531155 LOC106571865 coding downstream 394938 34946140 ~ 35104382 (+)
LOC110531964 LOC106571867 coding downstream 664669 35215871 ~ 35360678 (+)
LOC110531967 NA coding downstream 848477 35399679 ~ 35403549 (+)
G797041 NA non-coding upstream 6257 34544137 ~ 34544589 (+)
G797039 NA non-coding upstream 6831 34543771 ~ 34544015 (+)
G797034 NA non-coding upstream 12286 34538133 ~ 34538560 (+)
G796626 NA non-coding upstream 118278 34428514 ~ 34432568 (+)
G796622 NA non-coding upstream 123957 34423976 ~ 34426889 (+)
G797057 NA non-coding downstream 9187 34560389 ~ 34560767 (+)
G797080 NA non-coding downstream 25643 34576845 ~ 34577308 (+)
G797101 NA non-coding downstream 39256 34590458 ~ 34590661 (+)
G797115 NA non-coding downstream 48155 34599357 ~ 34604314 (+)
G797132 NA non-coding downstream 63200 34614402 ~ 34615276 (+)
G796495 LOC106613263 other upstream 429106 34121422 ~ 34121740 (+)
G794886 LOC106577459 other upstream 1963458 32583606 ~ 32587388 (+)
G794893 NA other upstream 2048097 32502396 ~ 32502749 (+)
G794892 NA other upstream 2048491 32501847 ~ 32502355 (+)
zgc:112271 bola2 other upstream 2425995 32122682 ~ 32124851 (+)
G797056 NA other downstream 4729 34555931 ~ 34556622 (+)
G797932 pphln other downstream 813786 35364988 ~ 35372148 (+)
G799053 NA other downstream 1761927 36313129 ~ 36316805 (+)
G799578 LOC106571900 other downstream 2483216 37034418 ~ 37035918 (+)
G799858 LOC106571908 other downstream 3016043 37567245 ~ 37570411 (+)

Expression


Co-expression Network