G797057


Basic Information

Item Value
gene id G797057
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 34560389 ~ 34560767 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU907167
gtaagattttggacatgcgtcctcggggccgtggtcatcagtacctagtggattgggaggggtacggtcctgaggagaggagttgggttccctctcgggacgtgctggaccgttcgctgatcgatgatttcctccgttgccaccaggtttcctcctcgagtgcgccaggaggcgctcggtgagtgggggggtactgtcatgtattgtcatgttgtgtcctgttcctgttcttactcttcaccctgtctccctctgctggtcgtattaggttaccttttcttcccctctttcccccagctgttccttgtcttctctaactacctcgttcaccccttttcccacctgttccctttttccctctgattaggtctctatatct

Function

NR:

description
PREDICTED: thrombospondin-3b-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU907167 True 379 lncRNA 0.54 1 34560389 34560767

Neighbor

gene id symbol gene type direction distance location
LOC118966029 NA coding upstream 167427 34385884 ~ 34392962 (+)
LOC110531955 143b2 coding upstream 211092 34344355 ~ 34349297 (+)
LOC110531954 LOC106566658 coding upstream 262124 34281341 ~ 34298265 (+)
LOC110531951 LOC106571855 coding upstream 431518 34058069 ~ 34128871 (+)
rl32 rl32 coding upstream 502819 34052296 ~ 34057570 (+)
LOC110531960 NA coding downstream 49523 34610290 ~ 34612491 (+)
LOC110531961 LOC106571864 coding downstream 82152 34642919 ~ 34682784 (+)
LOC110531155 LOC106571865 coding downstream 385373 34946140 ~ 35104382 (+)
LOC110531964 LOC106571867 coding downstream 655104 35215871 ~ 35360678 (+)
LOC110531967 NA coding downstream 838912 35399679 ~ 35403549 (+)
G797045 NA non-coding upstream 9187 34550846 ~ 34551202 (+)
G797041 NA non-coding upstream 15800 34544137 ~ 34544589 (+)
G797039 NA non-coding upstream 16374 34543771 ~ 34544015 (+)
G797034 NA non-coding upstream 21829 34538133 ~ 34538560 (+)
G796626 NA non-coding upstream 127821 34428514 ~ 34432568 (+)
G797080 NA non-coding downstream 16078 34576845 ~ 34577308 (+)
G797101 NA non-coding downstream 29691 34590458 ~ 34590661 (+)
G797115 NA non-coding downstream 38590 34599357 ~ 34604314 (+)
G797132 NA non-coding downstream 53635 34614402 ~ 34615276 (+)
G797201 NA non-coding downstream 185149 34745916 ~ 34776053 (+)
G797056 NA other upstream 3767 34555931 ~ 34556622 (+)
G796495 LOC106613263 other upstream 438649 34121422 ~ 34121740 (+)
G794886 LOC106577459 other upstream 1973001 32583606 ~ 32587388 (+)
G794893 NA other upstream 2057640 32502396 ~ 32502749 (+)
G794892 NA other upstream 2058034 32501847 ~ 32502355 (+)
G797932 pphln other downstream 804221 35364988 ~ 35372148 (+)
G799053 NA other downstream 1752362 36313129 ~ 36316805 (+)
G799578 LOC106571900 other downstream 2473651 37034418 ~ 37035918 (+)
G799858 LOC106571908 other downstream 3006478 37567245 ~ 37570411 (+)
G800834 NA other downstream 3509449 38070216 ~ 38071433 (+)

Expression


Co-expression Network