G797071


Basic Information

Item Value
gene id G797071
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 34570155 ~ 34570811 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU907182
gagagagtgtgtgtgtttgcctgcgagcgtgctggtgtgtgtgcatgcgggtGGTTGCTTGCACGCATGGTGCATGAGTGCGTGCACATTCttgtggtacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatataaaactgtatttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatctattggatatttcaaacttttttaacaaatcaaaaactgaagaattgggcgtgcaaaattattcagcccctttactttcagtgcagcaaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtataatcaagtctccgtataaatgcacctgcactgtgatagtctcagaggtccgttaaaagcgtagagagcatcatgaagaacaaggaacacaccaggcaggtccgagatactgttgtgaagaagtttaaagccggatttggatacaaaaatatttcccaagctttaaacatcccaaggagcactgtgcaagcgataatattgaaatggaaggagtatcagaccactgcaaatctaccaag

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU907182 True 657 lncRNA 0.42 1 34570155 34570811

Neighbor

gene id symbol gene type direction distance location
LOC110531958 LOC106571859 coding downstream 38727 34429068 ~ 34531428 (-)
LOC110531957 LOC106571860 coding downstream 184282 34362170 ~ 34385873 (-)
LOC110531153 LOC106571861 coding downstream 208392 34359904 ~ 34361763 (-)
LOC110531953 LOC106571856 coding downstream 406979 34133570 ~ 34163176 (-)
LOC110531949 LOC106571850 coding downstream 535665 34006952 ~ 34034490 (-)
LOC118966030 NA coding upstream 25729 34596540 ~ 34607133 (-)
eif2d eif2d coding upstream 46689 34617500 ~ 34636294 (-)
LOC110533011 LOC106571887 coding upstream 144929 34715740 ~ 34721316 (-)
LOC110531962 LOC106571888 coding upstream 158523 34729334 ~ 34802834 (-)
LOC110531965 pphln coding upstream 793241 35364052 ~ 35372459 (-)
G797070 NA non-coding downstream 99 34565761 ~ 34570056 (-)
G797042 NA non-coding downstream 25569 34544081 ~ 34544586 (-)
G796960 NA non-coding downstream 55149 34513772 ~ 34515006 (-)
G796855 NA non-coding downstream 143270 34423962 ~ 34426885 (-)
G796951 NA non-coding downstream 160575 34409236 ~ 34409580 (-)
G797075 NA non-coding upstream 1702 34572513 ~ 34572849 (-)
G797081 NA non-coding upstream 5778 34576589 ~ 34577263 (-)
G797096 NA non-coding upstream 16810 34587621 ~ 34587896 (-)
G797102 NA non-coding upstream 19933 34590744 ~ 34591132 (-)
G797107 NA non-coding upstream 22832 34593643 ~ 34593845 (-)
G796733 rl32 other downstream 512606 34051059 ~ 34057549 (-)
G794311 LOC106577443 other downstream 2541887 32026071 ~ 32028445 (-)
G793842 NA other downstream 2907957 31661239 ~ 31662198 (-)
G793489 NA other downstream 3151182 31418455 ~ 31418973 (-)
G793472 NA other downstream 3166286 31403482 ~ 31403869 (-)
G797605 NA other upstream 299144 34869955 ~ 34875879 (-)
G798195 NA other upstream 783408 35354219 ~ 35354675 (-)
LOC110531966 LOC106571884 other upstream 815042 35381661 ~ 35400349 (-)
LOC118966032 LOC106571870 other upstream 921215 35492026 ~ 35521884 (-)
LOC110531979 brpf1 other upstream 1406611 35948544 ~ 35979307 (-)

Expression


Co-expression Network