G797101



Basic Information


Item Value
gene id G797101
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 34590458 ~ 34590661 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU907212
AGCAACCAGCACACGTGCCagaatgtttttgttgttttctaATTCCAACCAACCCTTACTCTCTTCATGTCTATTCAATCAGTGGCATGCCTGTTTCGTTCACTCCTCCTCCAAGGAATTTCCCTCTGCTTTCAACATGTTTTATGAACAGCAGAAATCCTTTTCTATACACCTCTAATCAGTGTGGTTGGCATGCTGTTGTAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU907212 True 204 lncRNA 0.42 1 34590458 34590661

Neighbor


gene id symbol gene type direction distance location
LOC118966029 NA coding upstream 197496 34385884 ~ 34392962 (+)
LOC110531955 143b2 coding upstream 241161 34344355 ~ 34349297 (+)
LOC110531954 LOC106566658 coding upstream 292193 34281341 ~ 34298265 (+)
LOC110531951 LOC106571855 coding upstream 461587 34058069 ~ 34128871 (+)
rl32 rl32 coding upstream 532888 34052296 ~ 34057570 (+)
LOC110531960 NA coding downstream 19629 34610290 ~ 34612491 (+)
LOC110531961 LOC106571864 coding downstream 52258 34642919 ~ 34682784 (+)
LOC110531155 LOC106571865 coding downstream 355479 34946140 ~ 35104382 (+)
LOC110531964 LOC106571867 coding downstream 625210 35215871 ~ 35360678 (+)
LOC110531967 NA coding downstream 809018 35399679 ~ 35403549 (+)
G797080 NA non-coding upstream 13150 34576845 ~ 34577308 (+)
G797057 NA non-coding upstream 29691 34560389 ~ 34560767 (+)
G797045 NA non-coding upstream 39256 34550846 ~ 34551202 (+)
G797041 NA non-coding upstream 45869 34544137 ~ 34544589 (+)
G797039 NA non-coding upstream 46443 34543771 ~ 34544015 (+)
G797115 NA non-coding downstream 8696 34599357 ~ 34604314 (+)
G797132 NA non-coding downstream 23741 34614402 ~ 34615276 (+)
G797201 NA non-coding downstream 155255 34745916 ~ 34776053 (+)
G797225 NA non-coding downstream 179402 34770063 ~ 34867567 (+)
G797271 NA non-coding downstream 227504 34818165 ~ 34824262 (+)
G797056 NA other upstream 33836 34555931 ~ 34556622 (+)
G796495 LOC106613263 other upstream 468718 34121422 ~ 34121740 (+)
G794886 LOC106577459 other upstream 2003070 32583606 ~ 32587388 (+)
G794893 NA other upstream 2087709 32502396 ~ 32502749 (+)
G794892 NA other upstream 2088103 32501847 ~ 32502355 (+)
G797932 pphln other downstream 774327 35364988 ~ 35372148 (+)
G799053 NA other downstream 1722468 36313129 ~ 36316805 (+)
G799578 LOC106571900 other downstream 2443757 37034418 ~ 37035918 (+)
G799858 LOC106571908 other downstream 2976584 37567245 ~ 37570411 (+)
G800834 NA other downstream 3479555 38070216 ~ 38071433 (+)

Expression



Co-expression Network