G797609


Basic Information

Item Value
gene id G797609
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 34914791 ~ 34937813 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU907779
gaataggagtaggaggagactcagagagaatgcggatgAGGAGGTGGTGGatgaataggagtaggaggagactcagagagaatgagtaggaggtgtaggaggaatatgagtaggaggagactcagcgaGAATGCGGAGGAGTTGGAGGAAGAATAGGAGTAGGGGGAGACTCAGAGGAtgcggaggaggaggtggaggaggaataggagtaggaggagactcagagagaatgcggaggaggtggagaaggaataggaaagGAATAGGAGTAGGTGCAGACTCAGAGAGAACGcgcaggaggtggagaaggaataggagtaggaggagactcagagagaatgaggagaaggaataggagtaggaggagactcagagagaatgcggaggaggtggaggaggaataggagtaggctcagagagaatgcggaggagaaataggagtaggaggagactccgagagaatgcggaggaggtggagtaggaataggagtaggaggagactcagagagaatgtggaggaggtggaggag
>TU907780
tgcggaggacgtggagaaggaataagagtaggaggagactcagagagaatgcggaggaggtggagaaggaataggagtaggaggagactcagagagaatgaggagaaggaataggagtaggaggagactcagagagaatgcggaggaggtggagaaggaataggagtaggaggagactcagagagaatgaggagaaggaataggagtaggaggagactcagagagaatgcggaggaggtggaggaggaataggagtaggctcagagagaatgcggaggagaaataggagtaggaggagactccgagagaatgcggaggaggtggagtaggaataggagtaggaggagactcagagagaatgtggaggaggtggaggag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU907779 False 530 lncRNA 0.53 3 34914791 34937813
TU907780 True 378 lncRNA 0.52 3 34914791 34925835

Neighbor

gene id symbol gene type direction distance location
LOC110531962 LOC106571888 coding downstream 111957 34729334 ~ 34802834 (-)
LOC110533011 LOC106571887 coding downstream 193475 34715740 ~ 34721316 (-)
eif2d eif2d coding downstream 278497 34617500 ~ 34636294 (-)
LOC118966030 NA coding downstream 307658 34596540 ~ 34607133 (-)
LOC110531958 LOC106571859 coding downstream 383363 34429068 ~ 34531428 (-)
LOC110531965 pphln coding upstream 426239 35364052 ~ 35372459 (-)
LOC110531966 LOC106571884 coding upstream 443848 35381661 ~ 35400349 (-)
LOC118966032 LOC106571870 coding upstream 557251 35492026 ~ 35521884 (-)
LOC110531156 wdr46 coding upstream 619054 35556867 ~ 35562538 (-)
LOC118936388 LOC106571889 coding upstream 626448 35564261 ~ 35566271 (-)
G797611 NA non-coding downstream 7217 34905487 ~ 34907574 (-)
G797607 NA non-coding downstream 28946 34881990 ~ 34885845 (-)
G797480 LOC106571864 non-coding downstream 238647 34666508 ~ 34676144 (-)
G797444 NA non-coding downstream 289692 34624645 ~ 34625099 (-)
G797443 NA non-coding downstream 302277 34612174 ~ 34612514 (-)
G797660 NA non-coding upstream 70915 35008728 ~ 35010049 (-)
G797667 NA non-coding upstream 91402 35029215 ~ 35044172 (-)
G797706 NA non-coding upstream 162689 35100502 ~ 35101902 (-)
G797707 NA non-coding upstream 168016 35105829 ~ 35108729 (-)
G797742 NA non-coding upstream 197728 35135541 ~ 35135846 (-)
G797605 NA other downstream 38912 34869955 ~ 34875879 (-)
G796733 rl32 other downstream 857242 34051059 ~ 34057549 (-)
G794311 LOC106577443 other downstream 2886523 32026071 ~ 32028445 (-)
G793842 NA other downstream 3252593 31661239 ~ 31662198 (-)
G793489 NA other downstream 3495818 31418455 ~ 31418973 (-)
G798195 NA other upstream 416406 35354219 ~ 35354675 (-)
LOC110531979 brpf1 other upstream 1039609 35948544 ~ 35979307 (-)
G798993 NA other upstream 1212525 36150338 ~ 36150637 (-)

Expression


Co-expression Network