G797326


Basic Information

Item Value
gene id G797326
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 34933988 ~ 34937847 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU907471
tctccacctcctctgcattctctctgagtctcctcctactcctattccttctccacctcctgcgCGTTCTCTCTGAGTCTGCACCTACTCCTATTCctttcctattccttctccacctcctccgcattctctctgagtctcctcctactcctattcctcctccacctcctcctccgcaTCCTCTGAGTCTCCCCCTACTCCTATTCTTCCTCCAACTCCTCCGCATTCtcgctgagtctcctcctactcatattcctcctacacctcctccaCATTATCTAAGTGTCTCCTCCTACTCAtattcctcctacacctcctactcattatctctgagtctcctcctagtcctattccttctccacctcctccgcattctctctgagtctcctcctactccaaTTCCTTCTCCACCTACTCCCcATCCTCTCTGAGTCTCCCCCTACTGCTATTCTTCCTCCAACTTTTACGCATTCtcgctgagtctcctcctactcctattcctcctccgcattctctctgagcctactgcttttcctcctacacctcctccgcattctctcttgacTCTCCTCTTACTCCTAGTCCTTCTCCTTCTACTCGTCATTCTTTCTgcgtctcctcctactcctaatccttctccacctcctactcattctctctgagtctcctcctactcctattcatCCACCACCTCCTcatccgcattctctctgagtctcctcctactcctattccttctccacctcctcctcattctctctgagtctc
>TU907472
cctAAATgtgtcctcctactcctattcctcctccacctccgccGCATTCACTCTGAGTCTCCTCGTACTCctattcctcttccacctctacctcttccgcattatctctgagtcttctcctactcctattcctcctccacctcctcctcattctccctgagtctcctcctactcctattcctcctccacctcctccgcattctccctgagtctcctcctactcctattcctccaccacctcctcctcattctccctgAGTCTCCTCCATTCCTAttctttctccacctcctccgaaTTCTTTCAGcatctcctcctactcctattccttctccacctcttcctccttctctctgagtctcctcctactcctattcttCCTCCAGCTACTCCGCATCCTCTCTGAGTCTCCCCCTACTCCTATTCTTCCTCCAACTCCTCCGCATTCtcgctgagtctcctcctacttcTATTACTtatccacctcttcctccttctctctgagtctcctccaacTTCTATTCTTCCTCCACCTACTTCGCATCCTCTCTGAGTCTCCCCCTACTCCTATTCTTTCTCCAACTCCTCTGCATTCTATccgagtctcctcctactcctattcctcctcctccattctctctgagtctcctcctactcctatacCTTCTCCACCTAATTTTCCTTCTTTCTgcttctcctcctactcctattccttctccacctcctccgcattctctctgtgtctcctcctactcctattcccctccacctccttctccgcATCCTCTCTGAGTCTCCCCCTACTGCTATTCTTCCTCCAACTTTTACGCATTCtcgctgagtctcctcctactcctattcctcctccgcattctctctgagcctactgcttttcctcctacacctcctccgcattctctcttgacTCTCCTCTTACTCCTAGTCCTTCTCCTTCTACTCGTCATTCTTTCTgcgtctcctcctactcctaatccttctccacctcctactcattctctctgagtctcctcctactcctattcatCCACCACCTCCTcatccgcattctctctgagtctcctcctactcctattccttctccacctcctcctcattctctctgagtctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU907471 False 768 lncRNA 0.51 3 34933988 34937847
TU907472 True 1127 lncRNA 0.51 3 34935557 34937847

Neighbor

gene id symbol gene type direction distance location
LOC110531961 LOC106571864 coding upstream 251204 34642919 ~ 34682784 (+)
LOC110531960 NA coding upstream 321497 34610290 ~ 34612491 (+)
LOC118966029 NA coding upstream 541026 34385884 ~ 34392962 (+)
LOC110531955 143b2 coding upstream 584691 34344355 ~ 34349297 (+)
LOC110531954 LOC106566658 coding upstream 635723 34281341 ~ 34298265 (+)
LOC110531155 LOC106571865 coding downstream 8293 34946140 ~ 35104382 (+)
LOC110531964 LOC106571867 coding downstream 278024 35215871 ~ 35360678 (+)
LOC110531967 NA coding downstream 461832 35399679 ~ 35403549 (+)
LOC110531968 LOC106571869 coding downstream 483718 35421565 ~ 35469496 (+)
LOC110531969 LOC106571870 coding downstream 549521 35487368 ~ 35496138 (+)
G797312 NA non-coding upstream 11592 34882000 ~ 34922396 (+)
G797319 NA non-coding upstream 18003 34913655 ~ 34915985 (+)
G797309 NA non-coding upstream 58106 34868307 ~ 34875882 (+)
G797225 NA non-coding upstream 66421 34770063 ~ 34867567 (+)
G797271 NA non-coding upstream 109726 34818165 ~ 34824262 (+)
G797400 NA non-coding downstream 86137 35023984 ~ 35025565 (+)
G797224 NA non-coding downstream 166651 35104498 ~ 35108733 (+)
G797708 NA non-coding downstream 177107 35114954 ~ 35115290 (+)
G797730 NA non-coding downstream 190472 35128319 ~ 35128622 (+)
G797739 NA non-coding downstream 195115 35132962 ~ 35133250 (+)
G797056 NA other upstream 377366 34555931 ~ 34556622 (+)
G796495 LOC106613263 other upstream 812248 34121422 ~ 34121740 (+)
G794886 LOC106577459 other upstream 2346600 32583606 ~ 32587388 (+)
G794893 NA other upstream 2431239 32502396 ~ 32502749 (+)
G794892 NA other upstream 2431633 32501847 ~ 32502355 (+)
G797932 pphln other downstream 427141 35364988 ~ 35372148 (+)
G799053 NA other downstream 1375282 36313129 ~ 36316805 (+)
G799578 LOC106571900 other downstream 2096571 37034418 ~ 37035918 (+)
G799858 LOC106571908 other downstream 2629398 37567245 ~ 37570411 (+)
G800834 NA other downstream 3132369 38070216 ~ 38071433 (+)

Expression


Co-expression Network