G797660


Basic Information

Item Value
gene id G797660
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 35008728 ~ 35010049 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU907832
GGTTAAGCATGATATCAGcagcagttagggttagggctgagcaGGATATCCACATTTGTTAGGGTTACGCATGATATCAGCATTTGTTAGGGTTAAGCATGATATCAGTAGcatttagggttaggaataaGCATGATATAAGCAGCAGTTAGGGTTAAGCATGATATAACTAGCTTTTTGGGTTAGGAATAAGCATGATATCAGCAACAGTTAGGGCTAGCGTTAAGCATGATATCAtcagaagttagggttagggttgagcagGATATCAGCATTTGTTAGGGTTAAGCATGATATCAGCAGCAGTTAGGGTTAAGCATGATATCAGCATTTGTTAGGGTTAAGCATAATATCAGCATTTGTTAGGGTTAAACGTGATATCAGCAGCAGTTAGGGTTAAGCATGATATCAGCAGCAGTTAGCGTTAAGCATGATATCAGCAGCAGTTAGGTTAGGGATAAGCATGATATCAGCAGCAGTTAGGCTTAAGCATGATATCAGAAGCAGTTAGGGTTAAGCATGATATCAGCAGCAGTTAGGGTTAGAGATAAGCATGATATCAGCAGCAGTTAGGGTTAGAGATACGCATGATATCAGCAGCAGTTAGGGTTAGAGATAAGCATGATATCAGCAGAAGTTAGGTTAGGGATAAGCATGATATCAGCAGCAGTTTGAGTTAGGGTTAAGCATGATATCAGCAGCAGTTAGGGTTAGAGATAAGCATGAtattgtgacgaccctcccactctgtctgtctgccgtattctgtctttgttcttgtttccttattaggatgccggtgggcggagttgagagggtcgtcagcttcacctgggccaggtgtctcccaggataaatagacctcttccacattcatggaggagactctctccatgcagacacctttgtagattgtgttgtggttcttggtggccttttgtttgcttgctttggcacctttcaacaccctgcattatcacattcatgcatgcaaaacactcacttacactactgattactgattacacacaccattgtatattttccttagttgctttatttaataaatatatattttgttactccttatctccacgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU907832 True 1098 lncRNA 0.41 2 35008728 35010049

Neighbor

gene id symbol gene type direction distance location
LOC110531962 LOC106571888 coding downstream 205894 34729334 ~ 34802834 (-)
LOC110533011 LOC106571887 coding downstream 287412 34715740 ~ 34721316 (-)
eif2d eif2d coding downstream 372434 34617500 ~ 34636294 (-)
LOC118966030 NA coding downstream 401595 34596540 ~ 34607133 (-)
LOC110531958 LOC106571859 coding downstream 477300 34429068 ~ 34531428 (-)
LOC110531965 pphln coding upstream 354003 35364052 ~ 35372459 (-)
LOC110531966 LOC106571884 coding upstream 371612 35381661 ~ 35400349 (-)
LOC118966032 LOC106571870 coding upstream 485015 35492026 ~ 35521884 (-)
LOC110531156 wdr46 coding upstream 546818 35556867 ~ 35562538 (-)
LOC118936388 LOC106571889 coding upstream 554212 35564261 ~ 35566271 (-)
G797608 NA non-coding downstream 69272 34902433 ~ 34939456 (-)
G797609 NA non-coding downstream 70915 34914791 ~ 34937813 (-)
G797612 NA non-coding downstream 90531 34913900 ~ 34918197 (-)
G797611 NA non-coding downstream 101154 34905487 ~ 34907574 (-)
G797607 NA non-coding downstream 122883 34881990 ~ 34885845 (-)
G797667 NA non-coding upstream 19166 35029215 ~ 35044172 (-)
G797706 NA non-coding upstream 90453 35100502 ~ 35101902 (-)
G797707 NA non-coding upstream 95780 35105829 ~ 35108729 (-)
G797742 NA non-coding upstream 125492 35135541 ~ 35135846 (-)
G797751 NA non-coding upstream 133506 35143555 ~ 35143839 (-)
G797605 NA other downstream 132849 34869955 ~ 34875879 (-)
G796733 rl32 other downstream 951179 34051059 ~ 34057549 (-)
G794311 LOC106577443 other downstream 2980460 32026071 ~ 32028445 (-)
G793842 NA other downstream 3346530 31661239 ~ 31662198 (-)
G793489 NA other downstream 3589755 31418455 ~ 31418973 (-)
G798195 NA other upstream 344170 35354219 ~ 35354675 (-)
LOC110531979 brpf1 other upstream 967373 35948544 ~ 35979307 (-)
G798993 NA other upstream 1140289 36150338 ~ 36150637 (-)

Expression


Co-expression Network