G797842


Basic Information

Item Value
gene id G797842
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 35206886 ~ 35207193 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU908024
ccctagccttgcacgtcctgtgccatctcagcactacagtgctcctagcagtgctaaccgtggcgggcgtggtgctggtcaggcaccgtgttatgcggtggttcgcacggtgtccccagtacgcgtgcttagcccggtgcgctacatcccagcttcCCACATCTGctgggctagggtgaagatccagccagggcggttggtgccagccctgctctcaagatctccagtacgccttcacggtccggtccatccagtgccacctccacacaccagccctccgggggcagctccccgcaccaggcttcctg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU908024 True 308 lncRNA 0.64 1 35206886 35207193

Neighbor

gene id symbol gene type direction distance location
LOC110531155 LOC106571865 coding upstream 102504 34946140 ~ 35104382 (+)
LOC110531961 LOC106571864 coding upstream 524102 34642919 ~ 34682784 (+)
LOC110531960 NA coding upstream 594395 34610290 ~ 34612491 (+)
LOC118966029 NA coding upstream 813924 34385884 ~ 34392962 (+)
LOC110531955 143b2 coding upstream 857589 34344355 ~ 34349297 (+)
LOC110531964 LOC106571867 coding downstream 8678 35215871 ~ 35360678 (+)
LOC110531967 NA coding downstream 192486 35399679 ~ 35403549 (+)
LOC110531968 LOC106571869 coding downstream 214372 35421565 ~ 35469496 (+)
LOC110531969 LOC106571870 coding downstream 280175 35487368 ~ 35496138 (+)
LOC110531971 LOC106571873 coding downstream 337584 35544777 ~ 35551977 (+)
G797808 NA non-coding upstream 21581 35184859 ~ 35185305 (+)
G797804 NA non-coding upstream 25445 35181177 ~ 35181441 (+)
G797795 NA non-coding upstream 34347 35172320 ~ 35172539 (+)
G797789 NA non-coding upstream 37815 35168864 ~ 35169071 (+)
G797785 NA non-coding upstream 38687 35167909 ~ 35168199 (+)
G797844 NA non-coding downstream 923 35208116 ~ 35208403 (+)
G798000 NA non-coding downstream 235399 35442592 ~ 35449033 (+)
G798001 NA non-coding downstream 238856 35446049 ~ 35452569 (+)
G798006 NA non-coding downstream 249276 35456469 ~ 35487180 (+)
G797056 NA other upstream 650264 34555931 ~ 34556622 (+)
G796495 LOC106613263 other upstream 1085146 34121422 ~ 34121740 (+)
G794886 LOC106577459 other upstream 2619498 32583606 ~ 32587388 (+)
G794893 NA other upstream 2704137 32502396 ~ 32502749 (+)
G794892 NA other upstream 2704531 32501847 ~ 32502355 (+)
G797932 pphln other downstream 157795 35364988 ~ 35372148 (+)
G799053 NA other downstream 1105936 36313129 ~ 36316805 (+)
G799578 LOC106571900 other downstream 1827225 37034418 ~ 37035918 (+)
G799858 LOC106571908 other downstream 2360052 37567245 ~ 37570411 (+)
G800834 NA other downstream 2863023 38070216 ~ 38071433 (+)

Expression


Co-expression Network