G797932 (pphln)


Basic Information

Item Value
gene id G797932
gene name pphln
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 35364988 ~ 35372148 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU908119
acacacacacacacacacacacacatataaacatatTTTCATGGCACGTGAGAGGTTGTTTTGTGGCTCCTGTTCCAGTGAGGAGCTTAGCACAGATGGTCTAAAGAAACTCAGCTCACAGTATTACCAGAAGTATTCAGACACAGGAGAGGAGCAGGCAAAAAAagagactggagagggggaaataggagtgagggagagatagagaaagagagggggggtgaagagagaataATCACTAGAGATAGAGCGGATGTGAAGAGAGGGTGAAAGAAAGAAGGTGAAAGAGAGCGGTTAGAAAGTAAAagtgggaaagagggagagagagttctgGGAGAGATGCTTGGGGCAAGAGGTCCCGTCATGTGTGTGCCATTACCACGGAGTGGATTAATAGTCCAAGGTAGCAGCACTCACGCACAGAGAGCTGTTCACACCATGCAAAGGTGTATGTTGGTTGGTTCTTCGATCCTTTtggggacatttcccacatctcatgaggacaaaggctattttaaggtTAGTGTTACAATTAGGGTTGGTTGGTGCCTGCGTGCATGAATgcgtagcctagcggttagagcgttgggccagtaaccgaaaggtggcTAGTTCGAATCCCCGAACCGACAACgggaaaaatctgtcattctgccctttAGCAAAGCAATTAATCCCCCACAACAAAAATGTTctatttattgtgtgtgtgtctttggagGACGAGTATATCAGCTACCTGTTGCCAGACTGCTCTCTCACAGAGCCTACCTTCTCCAGTTACCATGGAGATGTGAAGAGCGAGAGTGAACTTCTCATCAGTCGAGTGGATGGAGAGACAACACCCAACACACCTCCCACTGACAACGCTTCATGTGATGTTCTGTCACATTAACTGTGACGTATCAATCACAGCGCGTGTTTAAAAACCTATTGAAAGACAACCGAACTACGCCCATGTGATGACTGATTTATGATGAAAAAACCTGGACAAACAACCTGACAATAACAGGAGCTCCATCTTCGGCGTAATTCAGAGTCCACAGAGGCAGAGAGGTGATAGACCGGGGTCCCATTGTGACATAGCTGCTCTGAGAACATAATCCGCACAGCCCGAATGCACACCTCCTCACAATTCCCATCCAACGTGGCTCCGTGTACGCGTCCTCTATCCATTTCAATGTGTTGACGGTTGGAGAAATTGCTTGAGCCGCACAGATAATTCAAAAAGTATGAAAGCCAACGGTCCAATATTCTAGAACATTGCTGTGTGCACGCGTACACATTTTGGACTCTGATAGGCGCTTAAGAGTGATTGGAGGTAAACAACCCAGGGATGTACAACATCACCATGTATTGGCTCTGATCATGACTGATTACCTATTCAACTGATTCAGCTGCTAAAAGGAAGAAACAAATTATGATAAATTCGAGGCAGCTTCAGCTGGCCATTTCTCAATTAGTTTTGGCACCGCAGTGATCAAATCTCCCAAGCCTTTCTCcacaaccccctctctctttctctccatcctcatccaaCCCGCTCATAATCCAaccccctctttatctctctctcctctatgttacctctctaaccctctcaagctctgttttTGGTGCTGCTGCAGTGTGGTACATCCCCTCTCTTTCTCGATCTGTTTCACTGTACTGTGAATGGTGCTATACCTGCTCgatttctctcctcttctgttgGATGGCTCTGTTTCGTGCTGTGGCCCTGCTTATGGTGGAGGGGagctctctacccctctctctttctttgctgTGGGATCTCTCCTTCTCTTGAGACACTATGAACGACACAGGctgcttctccttctctctgctggGGCCTGCAGAAGACCTGAGAGCACTGCTGTGTTCTTTAGGAGTAGAGGCCCTGGCGGGACCGCTCCTGTCCATGTTCCTCTGGTCGTTGTACTGGTTGTTAGGGCACGGTGGTGGGCCGGACTGGTCCCTCCAGTTGAACCGTGGGCGAGGGGTGAAAGGGTGGTACCTTTGGAACCCAAAACTGAAGCGGGGCTTCCGGAATGAATGATCGTCCCTTATGAATCGTGGTCTGTAGAATCTTCCTCCAAATCTTGGTCTAAATGAACCAGTTATTCTGGGTCTAGGTGGACTTCTCATTCTTCTGAAAGGTTGTTTCTCCTCCTCAGTGTTATGTTTGATAGGTACGTCGCTGGGCCTCTTGTCACGTGACTCTTCACTGCGTTCTTTGTGTGGCATGGTGGAGCTCTGCCCTGTGAAGATTCCTGCTGCCGTTGATCCATTTATTTTGTTTAGAGGAGCCAGTTTAATTGTGTTGTCTCCAGCAGCGCACGTTTGATGTTTAAGTGTCGTCTTGTGTTGCTCTATGACATTCGTTTAATTGTCACCTCACAGCATTTCTTTCGAGACGGCTTCATTTTGGTTTCGATTTCTACGCGAGCAATGCAGAAGGTGTAGCCTAGTGGTCCCTTGTGGACATTCAACTTCTCGTTTTAAAAGGCTGTGTAGGTAAGCTTTCCAGAGACAGCACACCAATGAGTGGGTAATATTAGCTGACTAAACTCAACTACATGGTAAAGTCAATTTCTGGTAA

Function

NR:

description
uncharacterized protein LOC110531965

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU908119 True 2602 TUCP 0.47 6 35364988 35372148

Neighbor

gene id symbol gene type direction distance location
LOC110531964 LOC106571867 coding upstream 4310 35215871 ~ 35360678 (+)
LOC110531155 LOC106571865 coding upstream 260606 34946140 ~ 35104382 (+)
LOC110531961 LOC106571864 coding upstream 682204 34642919 ~ 34682784 (+)
LOC110531960 NA coding upstream 752497 34610290 ~ 34612491 (+)
LOC118966029 NA coding upstream 972026 34385884 ~ 34392962 (+)
LOC110531967 NA coding downstream 27531 35399679 ~ 35403549 (+)
LOC110531968 LOC106571869 coding downstream 49417 35421565 ~ 35469496 (+)
LOC110531969 LOC106571870 coding downstream 115220 35487368 ~ 35496138 (+)
LOC110531971 LOC106571873 coding downstream 172629 35544777 ~ 35551977 (+)
LOC110531972 LOC106566626 coding downstream 294274 35666422 ~ 35744420 (+)
G797844 NA non-coding upstream 156585 35208116 ~ 35208403 (+)
G797842 NA non-coding upstream 157795 35206886 ~ 35207193 (+)
G797808 NA non-coding upstream 179683 35184859 ~ 35185305 (+)
G797804 NA non-coding upstream 183547 35181177 ~ 35181441 (+)
G797795 NA non-coding upstream 192449 35172320 ~ 35172539 (+)
G798000 NA non-coding downstream 70444 35442592 ~ 35449033 (+)
G798001 NA non-coding downstream 73901 35446049 ~ 35452569 (+)
G798006 NA non-coding downstream 84321 35456469 ~ 35487180 (+)
G797056 NA other upstream 808366 34555931 ~ 34556622 (+)
G796495 LOC106613263 other upstream 1243248 34121422 ~ 34121740 (+)
G794886 LOC106577459 other upstream 2777600 32583606 ~ 32587388 (+)
G794893 NA other upstream 2862239 32502396 ~ 32502749 (+)
G794892 NA other upstream 2862633 32501847 ~ 32502355 (+)
G799053 NA other downstream 940981 36313129 ~ 36316805 (+)
G799578 LOC106571900 other downstream 1662270 37034418 ~ 37035918 (+)
G799858 LOC106571908 other downstream 2195097 37567245 ~ 37570411 (+)
G800834 NA other downstream 2698068 38070216 ~ 38071433 (+)
G801778 NA other downstream 3415913 38788061 ~ 38788354 (+)

Expression


Co-expression Network