G798006


Basic Information

Item Value
gene id G798006
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 35456469 ~ 35487180 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU908209
cctggatgggagaccagatgctgctggaagtggtgctggagggcctctggtctaaaaaatatcccaatgccccagggcagtgattggggacactgccctgtgtagggtgccgtctttcagatgggatgttaaacgggtgtcctgactctctgaggtcattaaagatcccatggcacttatcctaagagtaggagtgttaaccctgttgtcctggctaaattcccaacc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU908209 True 228 lncRNA 0.52 2 35456469 35487180

Neighbor

gene id symbol gene type direction distance location
LOC110531967 NA coding upstream 52920 35399679 ~ 35403549 (+)
LOC110531964 LOC106571867 coding upstream 95791 35215871 ~ 35360678 (+)
LOC110531155 LOC106571865 coding upstream 352087 34946140 ~ 35104382 (+)
LOC110531961 LOC106571864 coding upstream 773685 34642919 ~ 34682784 (+)
LOC110531960 NA coding upstream 843978 34610290 ~ 34612491 (+)
LOC110531969 LOC106571870 coding downstream 188 35487368 ~ 35496138 (+)
LOC110531971 LOC106571873 coding downstream 57597 35544777 ~ 35551977 (+)
LOC110531972 LOC106566626 coding downstream 179242 35666422 ~ 35744420 (+)
LOC110531973 LOC106571875 coding downstream 264832 35752012 ~ 35856104 (+)
LOC110531975 LOC106571876 coding downstream 398753 35885933 ~ 35893410 (+)
G798001 NA non-coding upstream 3900 35446049 ~ 35452569 (+)
G798000 NA non-coding upstream 7436 35442592 ~ 35449033 (+)
G797844 NA non-coding upstream 248066 35208116 ~ 35208403 (+)
G797842 NA non-coding upstream 249276 35206886 ~ 35207193 (+)
G798100 NA non-coding downstream 107981 35595161 ~ 35595478 (+)
G798101 NA non-coding downstream 108345 35595525 ~ 35596107 (+)
G798107 NA non-coding downstream 116409 35603589 ~ 35603874 (+)
G798382 NA non-coding downstream 145002 35632182 ~ 35632413 (+)
G797932 pphln other upstream 84321 35364988 ~ 35372148 (+)
G797056 NA other upstream 899847 34555931 ~ 34556622 (+)
G796495 LOC106613263 other upstream 1334729 34121422 ~ 34121740 (+)
G794886 LOC106577459 other upstream 2869081 32583606 ~ 32587388 (+)
G794893 NA other upstream 2953720 32502396 ~ 32502749 (+)
G799053 NA other downstream 825949 36313129 ~ 36316805 (+)
G799578 LOC106571900 other downstream 1547238 37034418 ~ 37035918 (+)
G799858 LOC106571908 other downstream 2080065 37567245 ~ 37570411 (+)
G800834 NA other downstream 2583036 38070216 ~ 38071433 (+)
G801778 NA other downstream 3300881 38788061 ~ 38788354 (+)

Expression


Co-expression Network