G798890


Basic Information

Item Value
gene id G798890
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 35931264 ~ 35932005 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU909237
tctcttggctccacaatgtctgtgtgccagtcaatgtgtctctgtgatcttgtcaaggagggggtatttgatatatgcctgttgataggttttgttttatggttctgagagcgagaaaataacatagtttaggagacaaagctgaacgataatttatggccaatgctgtctggctatgtgtgtctttgctataaaggatctcagttgcaatgtgtaaggactctcagagaattcattgatagacactgaattgatctgagagtcacagggttgtgatgtagctcatataattaaagatggactttatgataactctgacttgtgcgtggtttgctctcatgatttggtaaatacaggaaatttccacgacactccTAAAAAGTTATATATTACAGCGTTAAAGCAAAAACGAAAGTAggatggttggtcagggtggatgggtacCTATATAAATGCTAATTAGGTTGCGTCTTCAAATCTCATCACCAACAACTTTagaattttagctaattagcaacgttgcaactacttactactttttagctactttgcaactacttagcatgttagctaacccttccccttaaCAGTTTAAcataactcctaaccttaacccttaacccctaacctagctaaagttagcgttagccacctagctagcgttagccacctagctaacgttagtgacAACAAAtttaaattcgtaacatatcatagcacggagccccaggccgagggagat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU909237 True 742 lncRNA 0.40 1 35931264 35932005

Neighbor

gene id symbol gene type direction distance location
LOC110531978 LOC106571879 coding downstream 3551 35918737 ~ 35927713 (-)
LOC118966037 NA coding downstream 12538 35915945 ~ 35918726 (-)
LOC118966036 NA coding downstream 17426 35911525 ~ 35913838 (-)
LOC110531977 LOC106571877 coding downstream 26880 35896429 ~ 35904384 (-)
LOC110531976 NA coding downstream 45231 35879297 ~ 35886033 (-)
LOC110531979 brpf1 coding upstream 16539 35948544 ~ 35979307 (-)
LOC110531157 LOC106571792 coding upstream 48793 35980798 ~ 36110044 (-)
snap29 snap29 coding upstream 362433 36294438 ~ 36318652 (-)
LOC110531936 LOC106580204 coding upstream 403379 36335384 ~ 36369350 (-)
trnag-ucc-139 NA coding upstream 528801 36460806 ~ 36460877 (-)
G798883 NA non-coding downstream 16830 35914197 ~ 35914434 (-)
G798844 LOC106571875 non-coding downstream 105532 35821519 ~ 35825732 (-)
G798836 NA non-coding downstream 117612 35813392 ~ 35813652 (-)
G798744 NA non-coding downstream 218891 35669911 ~ 35712373 (-)
G798344 NA non-coding downstream 327614 35603433 ~ 35603650 (-)
G798901 NA non-coding upstream 27079 35959084 ~ 35961739 (-)
G798902 NA non-coding upstream 27873 35959878 ~ 35967217 (-)
G798906 NA non-coding upstream 36082 35968087 ~ 35969282 (-)
G798976 NA non-coding upstream 186918 36118923 ~ 36145645 (-)
G798992 NA non-coding upstream 216804 36148809 ~ 36149285 (-)
LOC118966032 LOC106571870 other downstream 409932 35492026 ~ 35521884 (-)
LOC110531966 LOC106571884 other downstream 544132 35381661 ~ 35400349 (-)
G798195 NA other downstream 576589 35354219 ~ 35354675 (-)
G797605 NA other downstream 1055385 34869955 ~ 34875879 (-)
G796733 rl32 other downstream 1873715 34051059 ~ 34057549 (-)
G798993 NA other upstream 218333 36150338 ~ 36150637 (-)
LOC110531982 LOC106571893 other upstream 895891 36827882 ~ 36907700 (-)
G800318 NA other upstream 1412390 37344395 ~ 37345147 (-)
LOC110532015 LOC106566767 other upstream 2909204 38839265 ~ 38841685 (-)

Expression


Co-expression Network