G798718


Basic Information

Item Value
gene id G798718
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 36149336 ~ 36149750 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU909032
ACATTTAAGAGGAACGAAGAAAACAAGACCAGGagggagcagacaggacagagagaacatgacaATAGGAAGCAATGGTCAGTCCCGTAAACATTTAGGAGCAGGGTGCACGAGAGAGCGCATCAGCAATCACGTTTTCAGATCCCCTGATGTGCCGCACATCGAGATGGAATGATTGTAAAAATAAACACCATCGCATTATCCTCTGGTTTGGACACATCATGGACCTCAAAAAAGTGAGGGGGTTATGGTCGGTGTAGACCACAATAGGTACTACCCCCGACCCGACATACACTTCGAAGTGTTGTAGCGCCCAAATGAGTGCTAGTGCTTCCTTTTCAATAACCGAATAGTTCAACTGATAATCGTTAAACTTTTTGGAAAAGAAACTAACAGGCCTCTCAACCCCAGACAC

Function

NR:

description
PREDICTED: uncharacterized protein LOC109045635

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU909032 True 415 lncRNA 0.46 1 36149336 36149750

Neighbor

gene id symbol gene type direction distance location
LOC110531975 LOC106571876 coding upstream 255926 35885933 ~ 35893410 (+)
LOC110531973 LOC106571875 coding upstream 293232 35752012 ~ 35856104 (+)
LOC110531972 LOC106566626 coding upstream 404916 35666422 ~ 35744420 (+)
LOC110531971 LOC106571873 coding upstream 597359 35544777 ~ 35551977 (+)
LOC110531969 LOC106571870 coding upstream 653198 35487368 ~ 35496138 (+)
LOC110531941 LOC106580207 coding downstream 99594 36249344 ~ 36262924 (+)
si:dkey-7l6.3 LOC106580210 coding downstream 237168 36386918 ~ 36396094 (+)
trnap-agg-57 NA coding downstream 323157 36472907 ~ 36472978 (+)
trnap-agg-58 NA coding downstream 324386 36474136 ~ 36474207 (+)
trnap-agg-59 NA coding downstream 327020 36476770 ~ 36476841 (+)
G798717 NA non-coding upstream 119 36148960 ~ 36149217 (+)
G798701 NA non-coding upstream 30517 36118168 ~ 36118819 (+)
G798584 NA non-coding upstream 212325 35936669 ~ 35937011 (+)
G798583 NA non-coding upstream 213119 35935674 ~ 35936217 (+)
G798569 LOC106571879 non-coding upstream 229583 35915737 ~ 35919753 (+)
G798719 NA non-coding downstream 212 36149962 ~ 36150371 (+)
G798672 NA non-coding downstream 2776 36152526 ~ 36235544 (+)
G798675 NA non-coding downstream 19020 36168770 ~ 36195022 (+)
G798673 NA non-coding downstream 22691 36172441 ~ 36219817 (+)
G798677 NA non-coding downstream 31837 36181587 ~ 36182854 (+)
G797932 pphln other upstream 777188 35364988 ~ 35372148 (+)
G797056 NA other upstream 1592714 34555931 ~ 34556622 (+)
G796495 LOC106613263 other upstream 2027596 34121422 ~ 34121740 (+)
G794886 LOC106577459 other upstream 3561948 32583606 ~ 32587388 (+)
G794893 NA other upstream 3646587 32502396 ~ 32502749 (+)
G799053 NA other downstream 163379 36313129 ~ 36316805 (+)
G799578 LOC106571900 other downstream 884668 37034418 ~ 37035918 (+)
G799858 LOC106571908 other downstream 1417495 37567245 ~ 37570411 (+)
G800834 NA other downstream 1920466 38070216 ~ 38071433 (+)
G801778 NA other downstream 2638311 38788061 ~ 38788354 (+)

Expression


Co-expression Network