G799011


Basic Information

Item Value
gene id G799011
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 36236949 ~ 36237149 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU909420
caggtagtcctggggcatggtcctagggctcaggtcctccgagagagagaaagcgggaaggagagaattagagaacgcacacttagattcacacaggacaccgaataggacaggagaagtactccagatataacaaactgaccctagccccccgacacataaactactgcagcataaatactggaggctgagacaggaggg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU909420 True 201 lncRNA 0.52 1 36236949 36237149

Neighbor

gene id symbol gene type direction distance location
LOC110531975 LOC106571876 coding upstream 343539 35885933 ~ 35893410 (+)
LOC110531973 LOC106571875 coding upstream 380845 35752012 ~ 35856104 (+)
LOC110531972 LOC106566626 coding upstream 492529 35666422 ~ 35744420 (+)
LOC110531971 LOC106571873 coding upstream 684972 35544777 ~ 35551977 (+)
LOC110531969 LOC106571870 coding upstream 740811 35487368 ~ 35496138 (+)
LOC110531941 LOC106580207 coding downstream 12195 36249344 ~ 36262924 (+)
si:dkey-7l6.3 LOC106580210 coding downstream 149769 36386918 ~ 36396094 (+)
trnap-agg-57 NA coding downstream 235758 36472907 ~ 36472978 (+)
trnap-agg-58 NA coding downstream 236987 36474136 ~ 36474207 (+)
trnap-agg-59 NA coding downstream 239621 36476770 ~ 36476841 (+)
G798672 NA non-coding upstream 1405 36152526 ~ 36235544 (+)
G798734 NA non-coding upstream 5936 36229107 ~ 36231013 (+)
G798674 NA non-coding upstream 8351 36192219 ~ 36228598 (+)
G798673 NA non-coding upstream 17132 36172441 ~ 36219817 (+)
G798676 NA non-coding upstream 25224 36187208 ~ 36211725 (+)
G799026 snap29 non-coding downstream 65923 36303072 ~ 36303901 (+)
G799089 NA non-coding downstream 144887 36382036 ~ 36382235 (+)
G799091 NA non-coding downstream 145987 36383136 ~ 36383353 (+)
G799096 NA non-coding downstream 161052 36398201 ~ 36399373 (+)
G799094 NA non-coding downstream 162675 36399824 ~ 36402989 (+)
G797932 pphln other upstream 864801 35364988 ~ 35372148 (+)
G797056 NA other upstream 1680327 34555931 ~ 34556622 (+)
G796495 LOC106613263 other upstream 2115209 34121422 ~ 34121740 (+)
G794886 LOC106577459 other upstream 3649561 32583606 ~ 32587388 (+)
G794893 NA other upstream 3734200 32502396 ~ 32502749 (+)
G799053 NA other downstream 75980 36313129 ~ 36316805 (+)
G799578 LOC106571900 other downstream 797269 37034418 ~ 37035918 (+)
G799858 LOC106571908 other downstream 1330096 37567245 ~ 37570411 (+)
G800834 NA other downstream 1833067 38070216 ~ 38071433 (+)
G801778 NA other downstream 2550912 38788061 ~ 38788354 (+)

Expression


Co-expression Network