G799193



Basic Information


Item Value
gene id G799193
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 36419826 ~ 36420085 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU909626
GCGGATATCTCATATCTGGCCACGGCAGGCAACAGATTGCCGTTGTAAACAACTGTGTGTCTACGTTCTACCAGCACAGCTGCCCTGTTGTCTACGGAGACACTGACAGTGTCATGGTCTCAGTTGGATACGGTCCCCGGGACATCCCCGAAAGGGACGTGTCTGATGTAGTCGTGCACAGAACAGATACGCTCCAGTCCGGGGACACTGACATCAAACTCCTTGAGAGCTTTGCCTGTAATGGCCAGAAGGCTGTGGGT

Function


NR:

description
DNA polymerase

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU909626 True 260 lncRNA 0.54 1 36419826 36420085

Neighbor


gene id symbol gene type direction distance location
LOC110531936 LOC106580204 coding downstream 50476 36335384 ~ 36369350 (-)
snap29 snap29 coding downstream 101174 36294438 ~ 36318652 (-)
LOC110531157 LOC106571792 coding downstream 309782 35980798 ~ 36110044 (-)
LOC110531979 brpf1 coding downstream 440519 35948544 ~ 35979307 (-)
LOC110531978 LOC106571879 coding downstream 492113 35918737 ~ 35927713 (-)
trnag-ucc-139 NA coding upstream 40721 36460806 ~ 36460877 (-)
trnag-ucc-140 NA coding upstream 42120 36462205 ~ 36462276 (-)
trnag-ucc-141 NA coding upstream 43523 36463608 ~ 36463679 (-)
trnag-ucc-142 NA coding upstream 44926 36465011 ~ 36465082 (-)
trnag-ucc-143 NA coding upstream 46329 36466414 ~ 36466485 (-)
G799192 NA non-coding downstream 3227 36416350 ~ 36416599 (-)
G799170 NA non-coding downstream 40135 36379375 ~ 36379691 (-)
G799117 LOC106580207 non-coding downstream 156917 36259961 ~ 36262909 (-)
G799019 NA non-coding downstream 175772 36243847 ~ 36244054 (-)
G798995 NA non-coding downstream 184193 36233938 ~ 36235633 (-)
G799196 NA non-coding upstream 17166 36437251 ~ 36437461 (-)
G799207 NA non-coding upstream 26085 36446170 ~ 36453033 (-)
G799208 NA non-coding upstream 26537 36446622 ~ 36447011 (-)
G799212 NA non-coding upstream 36107 36456192 ~ 36458634 (-)
trnag-ucc-169 NA non-coding upstream 103297 36523382 ~ 36523664 (-)
G798993 NA other downstream 269189 36150338 ~ 36150637 (-)
LOC118966032 LOC106571870 other downstream 898494 35492026 ~ 35521884 (-)
LOC110531966 LOC106571884 other downstream 1032694 35381661 ~ 35400349 (-)
G798195 NA other downstream 1065151 35354219 ~ 35354675 (-)
LOC110531982 LOC106571893 other upstream 407811 36827882 ~ 36907700 (-)
G800318 NA other upstream 924310 37344395 ~ 37345147 (-)
LOC110532015 LOC106566767 other upstream 2421124 38839265 ~ 38841685 (-)
G802100 NA other upstream 2546371 38966456 ~ 38996032 (-)
G802138 NA other upstream 2630445 39050530 ~ 39061381 (-)

Expression



Co-expression Network