XLOC_027098


Basic Information

Item Value
gene id XLOC_027098
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 8045442 ~ 8049258 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00057612
agacagacagacagacagacagacagacagacagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagtcagaCAGACGCaggcttatttatttaaatgacttttattaaGTTTACAAATAAGGTaacaaatgctgtttttattgGAGCGCAAATCGCAGTTTTATATGAAGCTCGAACATCCTATACTTAGTGCAAAACATACAGTTAAACATTGCCAATGATTCCCtacatgtttttgtttggttttcatGTTAAGCAATTCTTTTAACATTTTGTACAATGTTAAATATCAtacggagaaaaaaaaaacaacaaaacaaaacaaagaaacactGAATGAAAGTCGCCAGAGGACATCTAGAGACTCTAACGACAGCAAAAACAAGCGGATCGGATAGtagtacaaaacaaaataacttaatgaCAGGTCAGTAGCATTAAGTAAACATTGTTCTGTTGTATTTCTTTCCACAGGAGAGCAACTAGAAAGGTGGGTTTCATTCGTTCAATTAGATACGTTTCTtttttgagtgagtgagtgagtctgTGTGCATTTCTTTTGTGTAACTGAAGAATATatcatgcaaaaaaaatacaaatttatcatgtttttttttccatcacaATGTGTCTATCGATACTGGATGGCTAGTTCGCACATCAGCTCGCTACCGACGCATATCTATTATCTCAAAGTAAAGTGAAAAACAAAGAGGTTGTATTTTCAAAGGTGCTAAATCATTTACATCAGAGGTCAGAGGTgaatctcgtttttttttttttaacgttgtACGTCCTGCACTGCAGTTACATTAGCGCCCTCTACAGTCAAATAGGATGAACCTGCTTCTTACAGTCGAGAGCAAATTAACACTTGCGCGTATTTTGGAACGAGGACATGGCACTCAGAAGGTAGTACTACACGGATTTCCAATAGTCTGAACACTGAGCAGGTTGGACCTCTTTGTTAAAGACCTTTTGATGTGTTCACAGTTTGAACGAACCGAACAACGTAAAGTGGGGTAAAGCGGTGTGTACAAAGCAAGAGATAAAGGTATTCTCTAAACACAGAGAGCCAGCTGAAAATCTAAACTGTACAGTTGACCTAAAGTGAAGTTCCTGTACCAGGTTGTTTCACGCAGACGGCACGCTAAGCAGTACGTAACAAGTTGTAATCTAAGTCCTTTCAGTAGTTAAGAGCATCTTCACTACGTTTCTGTACCCCAAAAGGAGCTGTACATGTGTTTTCCGGTGAATCAGGACCGTTCTCTAATCATCTGCACGGTTTAACAACGCTAATAAGGTAGTTTTGACATTGCAGGTTAAGCATTTCGAATAGACTAAAGCATTTACAAGAGTGATTTGATTGATTGCTACAAAGAAAGAAGCTACTGATCTGCCGTAAAACCGAAGGCTGTTGCCAGTACAGTGGCGTTATATGAGCAGTGTGAGTTAAAAAATGTGGATTGCCgacaacaaacagaaaaatcTGCGAGTATTAGTCGTGTTTTGGCTTGTTCTTGTGTTGGTGAGGGATGCTAACCGTCTCTTCTCACCTTTCTGGTCCTTTTAACACTCGTCTTGCTGTCACACCTGTTGCTAAATGAGTAAAAAACATGCCTCTCTGCACATATCGGATGGGCTTTGACACTGGATGGCGTCAAAACCGATTGAATAGTGCTGCAAAAACATCTAGCTATTGGAGGTTTTGAAATACTTACAACATACTGCGTCCCCATGCATGCTAACTTTCCCCGTCCTGCCTTTCTATCTCGATCCCTCACCTTTCACAAGAACTGCTCACACTGCTTATGAATCCACCTTCTTTGGCCACGTAACATTGCACTCAAGTGTCCGTTGCTTTGTTTTCGTCTTCTCTTATCCCTTGCATCATCCCCGTGGCATATTTGTGAGCATGCAGGATGCTTGCCCAGACCCACTTTCAGTCTGCACCCCTACCCTTGCCTCAATCCCCAACAGTTATTATAGGCCTGGCGCGGCTAGGCCCTGCCCTACGTGCTCTTCAGATTGGGTCCGCCCGGGTGGCTGACTGACTTTTGCAAAGTGCTGATGTGGAAGGTCTGTAAAGGGGTGGGCACCTGGGGATATTGGCCCAGGGGTTGTGAGGTGGCCAGCAGACCGGCCTGGGTGTGCGTGGCCGCTCCAGCCCACTGGGCGCTGTAAGGTGCGGAGGGGTAGCCGTACTGCGGCGTGGGACACAAGGAGCCCTTCCGAGCTCCTAGAGAGGTAGCGGGAGTGTTGGGCATTGGTGGATGGCCGCTCAGAGTTGAAGCGATGCTTGGGCACAGCTGACCCGGAGCTGAGTACTTACGGCCCATGTTTACTGGAGGAACC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00057612 True 2395 lncRNA 0.43 2 8045442 8049258

Neighbor

gene id symbol gene type direction distance location
XLOC_027097 optn coding upstream 18124 8016457 ~ 8027318 (+)
XLOC_027096 camk1da coding upstream 62426 7888047 ~ 7983016 (+)
XLOC_027095 cdc123 coding upstream 161711 7876197 ~ 7883731 (+)
XLOC_027094 ucmaa coding upstream 194953 7841627 ~ 7850489 (+)
XLOC_027093 phyh coding upstream 209029 7827261 ~ 7836413 (+)
XLOC_027099 CU695020.2 coding downstream 85336 8134594 ~ 8134710 (+)
XLOC_027100 ninj2 coding downstream 119256 8168514 ~ 8208654 (+)
XLOC_027101 ERC1 coding downstream 163805 8213063 ~ 8515824 (+)
XLOC_027102 BX649324.3 coding downstream 454429 8503687 ~ 8503801 (+)
XLOC_027103 wnt5b coding downstream 483322 8532580 ~ 8663117 (+)
XLOC_027090 NA non-coding upstream 327783 7715601 ~ 7717659 (+)
XLOC_027088 NA non-coding upstream 378696 7652574 ~ 7666746 (+)
XLOC_027087 NA non-coding upstream 449745 7545660 ~ 7595697 (+)
XLOC_027085 NA non-coding upstream 538972 7415280 ~ 7506470 (+)
XLOC_027083 FO681358.1 non-coding upstream 881568 7163758 ~ 7163874 (+)
XLOC_027105 NA non-coding downstream 666867 8716125 ~ 8726451 (+)
XLOC_027107 NA non-coding downstream 825307 8874565 ~ 8885723 (+)
XLOC_027111 NA non-coding downstream 1058001 9107259 ~ 9148954 (+)

Expression


Co-expression Network