G799216


Basic Information

Item Value
gene id G799216
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 36523384 ~ 36523664 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU909656
cctgcagaatgtaggagcaattctgacttccaagtacaaggataatgattcaaatgtaatacacttgaaatgacatccagcccctaaaacaaatgaattcctcaggctctgcattggccgggaatcgaacccaggtcaactgcttggaaggcagctatgctcaccactataccaccaatgctatgtgcagctcagtagcaacattgagacatcgactcataatttgaccgtcattttggtggaaagtgataattcactttcacggtttaggtgtatgatta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU909656 True 281 lncRNA 0.43 1 36523384 36523664

Neighbor

gene id symbol gene type direction distance location
trnap-agg-90 NA coding upstream 170 36523143 ~ 36523214 (+)
trnap-agg-89 NA coding upstream 1746 36521567 ~ 36521638 (+)
trnap-agg-88 NA coding upstream 2977 36520336 ~ 36520407 (+)
trnap-agg-87 NA coding upstream 4380 36518933 ~ 36519004 (+)
trnap-agg-86 NA coding upstream 5611 36517702 ~ 36517773 (+)
trnap-agg-91 NA coding downstream 1941 36525605 ~ 36525676 (+)
trnap-agg-92 NA coding downstream 3172 36526836 ~ 36526907 (+)
trnap-agg-93 NA coding downstream 4403 36528067 ~ 36528138 (+)
trnap-agg-94 NA coding downstream 5634 36529298 ~ 36529369 (+)
trnap-agg-95 NA coding downstream 9321 36532985 ~ 36533056 (+)
G799214 NA non-coding upstream 28332 36476096 ~ 36495052 (+)
G799200 NA non-coding upstream 63966 36446170 ~ 36459418 (+)
G799201 NA non-coding upstream 75294 36446401 ~ 36448090 (+)
G799101 NA non-coding upstream 112567 36410613 ~ 36410817 (+)
G799094 NA non-coding upstream 120395 36399824 ~ 36402989 (+)
G799218 NA non-coding downstream 12574 36536238 ~ 36536482 (+)
G799219 NA non-coding downstream 14634 36538298 ~ 36538499 (+)
G799221 NA non-coding downstream 39728 36563392 ~ 36585315 (+)
trnap-agg-149 NA non-coding downstream 87203 36610867 ~ 36622475 (+)
G799239 NA non-coding downstream 107627 36631291 ~ 36631528 (+)
G799053 NA other upstream 206579 36313129 ~ 36316805 (+)
G797932 pphln other upstream 1151236 35364988 ~ 35372148 (+)
G797056 NA other upstream 1966762 34555931 ~ 34556622 (+)
G796495 LOC106613263 other upstream 2401644 34121422 ~ 34121740 (+)
G794886 LOC106577459 other upstream 3935996 32583606 ~ 32587388 (+)
G799578 LOC106571900 other downstream 510754 37034418 ~ 37035918 (+)
G799858 LOC106571908 other downstream 1043581 37567245 ~ 37570411 (+)
G800834 NA other downstream 1546552 38070216 ~ 38071433 (+)
G801778 NA other downstream 2264397 38788061 ~ 38788354 (+)
G801851 NA other downstream 2409288 38932952 ~ 38933868 (+)

Expression


Co-expression Network