G799218


Basic Information

Item Value
gene id G799218
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 36536238 ~ 36536482 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU909658
attccagatcgtggtcatatgaatttgtaggtcaaacggttcggaagctagagatgtttttgtgagaagaccgattataggtattgtctcatggtttgacaaaaaacgatctaggtccaccatctttcactgcagatatggaggggtaacataagcagttgtggaggattgagacggatacgccgagtcttaatctctctagttgaaaacggatctatttgaatgggtattttcaaaattaattg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU909658 True 245 lncRNA 0.40 1 36536238 36536482

Neighbor

gene id symbol gene type direction distance location
trnap-agg-97 NA coding upstream 725 36535442 ~ 36535513 (+)
trnap-agg-96 NA coding upstream 1957 36534210 ~ 36534281 (+)
trnap-agg-95 NA coding upstream 3182 36532985 ~ 36533056 (+)
trnap-agg-94 NA coding upstream 6869 36529298 ~ 36529369 (+)
trnap-agg-93 NA coding upstream 8100 36528067 ~ 36528138 (+)
trnap-agg-98 NA coding downstream 363 36536845 ~ 36536916 (+)
trnap-agg-99 NA coding downstream 2997 36539479 ~ 36539550 (+)
trnap-agg-100 NA coding downstream 4400 36540882 ~ 36540953 (+)
trnap-agg-101 NA coding downstream 5803 36542285 ~ 36542356 (+)
trnap-agg-102 NA coding downstream 8265 36544747 ~ 36544818 (+)
G799216 NA non-coding upstream 12574 36523384 ~ 36523664 (+)
G799214 NA non-coding upstream 41186 36476096 ~ 36495052 (+)
G799200 NA non-coding upstream 76820 36446170 ~ 36459418 (+)
G799201 NA non-coding upstream 88148 36446401 ~ 36448090 (+)
G799101 NA non-coding upstream 125421 36410613 ~ 36410817 (+)
G799219 NA non-coding downstream 1816 36538298 ~ 36538499 (+)
G799221 NA non-coding downstream 26910 36563392 ~ 36585315 (+)
trnap-agg-149 NA non-coding downstream 74385 36610867 ~ 36622475 (+)
G799239 NA non-coding downstream 94809 36631291 ~ 36631528 (+)
G799245 NA non-coding downstream 103348 36639830 ~ 36640639 (+)
G799053 NA other upstream 219433 36313129 ~ 36316805 (+)
G797932 pphln other upstream 1164090 35364988 ~ 35372148 (+)
G797056 NA other upstream 1979616 34555931 ~ 34556622 (+)
G796495 LOC106613263 other upstream 2414498 34121422 ~ 34121740 (+)
G794886 LOC106577459 other upstream 3948850 32583606 ~ 32587388 (+)
G799578 LOC106571900 other downstream 497936 37034418 ~ 37035918 (+)
G799858 LOC106571908 other downstream 1030763 37567245 ~ 37570411 (+)
G800834 NA other downstream 1533734 38070216 ~ 38071433 (+)
G801778 NA other downstream 2251579 38788061 ~ 38788354 (+)
G801851 NA other downstream 2396470 38932952 ~ 38933868 (+)

Expression


Co-expression Network