G799221


Basic Information

Item Value
gene id G799221
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 36563392 ~ 36585315 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU909661
attccagagagtggtcatatgaatttgtaggtcaaacggttcggaagctagagatgtttttgtgagaagaccgattataggtattgtctcatggtttgacaaaaaccgatctaggtccaccatctttcactgcagatatggaggggtaacataagcagttgtggaggattgagacggatacgccgagtcttaatctctctagttgaaaacggatctatttgaatgggtattttcaaaattaattgactttgattcatgtacctttgcgtcatttgactcaaaataaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU909661 True 288 lncRNA 0.39 2 36563392 36585315

Neighbor

gene id symbol gene type direction distance location
trnap-agg-115 NA coding upstream 725 36562596 ~ 36562667 (+)
trnap-agg-114 NA coding upstream 2128 36561193 ~ 36561264 (+)
trnap-agg-113 NA coding upstream 3359 36559962 ~ 36560033 (+)
trnap-agg-112 NA coding upstream 4590 36558731 ~ 36558802 (+)
trnap-agg-111 NA coding upstream 5993 36557328 ~ 36557399 (+)
trnap-agg-132 NA coding downstream 320 36585635 ~ 36585706 (+)
trnap-agg-133 NA coding downstream 1722 36587037 ~ 36587108 (+)
trnap-agg-134 NA coding downstream 3124 36588439 ~ 36588510 (+)
trnap-agg-135 NA coding downstream 4526 36589841 ~ 36589912 (+)
trnap-agg-136 NA coding downstream 5928 36591243 ~ 36591314 (+)
G799219 NA non-coding upstream 24893 36538298 ~ 36538499 (+)
G799218 NA non-coding upstream 26910 36536238 ~ 36536482 (+)
G799216 NA non-coding upstream 39728 36523384 ~ 36523664 (+)
G799214 NA non-coding upstream 68340 36476096 ~ 36495052 (+)
G799200 NA non-coding upstream 103974 36446170 ~ 36459418 (+)
trnap-agg-149 NA non-coding downstream 25552 36610867 ~ 36622475 (+)
G799239 NA non-coding downstream 45976 36631291 ~ 36631528 (+)
G799245 NA non-coding downstream 54515 36639830 ~ 36640639 (+)
G799249 NA non-coding downstream 59995 36645310 ~ 36645631 (+)
G799250 NA non-coding downstream 60369 36645684 ~ 36646031 (+)
G799053 NA other upstream 246587 36313129 ~ 36316805 (+)
G797932 pphln other upstream 1191244 35364988 ~ 35372148 (+)
G797056 NA other upstream 2006770 34555931 ~ 34556622 (+)
G796495 LOC106613263 other upstream 2441652 34121422 ~ 34121740 (+)
G794886 LOC106577459 other upstream 3976004 32583606 ~ 32587388 (+)
G799578 LOC106571900 other downstream 449103 37034418 ~ 37035918 (+)
G799858 LOC106571908 other downstream 981930 37567245 ~ 37570411 (+)
G800834 NA other downstream 1484901 38070216 ~ 38071433 (+)
G801778 NA other downstream 2202746 38788061 ~ 38788354 (+)
G801851 NA other downstream 2347637 38932952 ~ 38933868 (+)

Expression


Co-expression Network