G799239


Basic Information

Item Value
gene id G799239
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 36631291 ~ 36631528 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU909681
taaatagacagctcggtacattcagcttgtcaacacttcttacacaaacaagtagtgatgaagtcaagctCTTCCcatttgagccatgagagattgacatgcatatcattaaagTAGTAATGTCTATATTTGGATGGAAACCAAGCTAGTGAGAGGTATCAAGGAAGGTTGTAATTTCAGTTGAAAATTACCAACACTGCATCCAACCACAGCCCTGCTGGTTTCACTTTGGCAAACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU909681 True 238 lncRNA 0.40 1 36631291 36631528

Neighbor

gene id symbol gene type direction distance location
trnap-agg-150 NA coding upstream 18948 36612272 ~ 36612343 (+)
trnap-agg-149 NA coding upstream 20351 36610867 ~ 36622475 (+)
trnap-agg-148 NA coding upstream 21753 36609467 ~ 36609538 (+)
trnap-agg-147 NA coding upstream 23155 36608065 ~ 36608136 (+)
trnap-agg-146 NA coding upstream 25959 36605261 ~ 36605332 (+)
LOC110531983 NA coding downstream 303533 36935061 ~ 36937214 (+)
adtrp1 LOC106571895 coding downstream 306320 36937848 ~ 36942240 (+)
LOC110531160 LOC106571896 coding downstream 309981 36941509 ~ 36953375 (+)
LOC110531987 LOC106571899 coding downstream 329787 36961315 ~ 36970867 (+)
LOC118966039 NA coding downstream 399232 37030760 ~ 37063684 (+)
G799221 NA non-coding upstream 45976 36563392 ~ 36585315 (+)
G799219 NA non-coding upstream 92792 36538298 ~ 36538499 (+)
G799218 NA non-coding upstream 94809 36536238 ~ 36536482 (+)
G799216 NA non-coding upstream 107627 36523384 ~ 36523664 (+)
G799245 NA non-coding downstream 8302 36639830 ~ 36640639 (+)
G799249 NA non-coding downstream 13782 36645310 ~ 36645631 (+)
G799250 NA non-coding downstream 14156 36645684 ~ 36646031 (+)
G799258 LOC106588294 non-coding downstream 26320 36657848 ~ 36658297 (+)
G799262 NA non-coding downstream 38589 36670117 ~ 36670355 (+)
G799053 NA other upstream 314486 36313129 ~ 36316805 (+)
G797932 pphln other upstream 1259143 35364988 ~ 35372148 (+)
G797056 NA other upstream 2074669 34555931 ~ 34556622 (+)
G796495 LOC106613263 other upstream 2509551 34121422 ~ 34121740 (+)
G794886 LOC106577459 other upstream 4043903 32583606 ~ 32587388 (+)
G799578 LOC106571900 other downstream 402890 37034418 ~ 37035918 (+)
G799858 LOC106571908 other downstream 935717 37567245 ~ 37570411 (+)
G800834 NA other downstream 1438688 38070216 ~ 38071433 (+)
G801778 NA other downstream 2156533 38788061 ~ 38788354 (+)
G801851 NA other downstream 2301424 38932952 ~ 38933868 (+)

Expression


Co-expression Network