G799342


Basic Information

Item Value
gene id G799342
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 36804533 ~ 36804814 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU909791
gctcgccCTCTGACCGCAAGGCCCTACAAAGGGTagagcgtacggcccagtacatcactggggctaagctgcctgccatccaggacctctacaccaggcggtctcagaggaaggccctaaaaattgtcaaagaccctagCCACCCCAGtcctagactgttctctctactaccgcatggcaagcggtaccggagtgccaagtctaggacaaaaaggcttctcaacagtttttacccccaagccataagactcctgaacaggtaatcaaatggctacccggact

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU909791 True 282 lncRNA 0.55 1 36804533 36804814

Neighbor

gene id symbol gene type direction distance location
trnap-agg-150 NA coding upstream 192190 36612272 ~ 36612343 (+)
trnap-agg-149 NA coding upstream 193593 36610867 ~ 36622475 (+)
trnap-agg-148 NA coding upstream 194995 36609467 ~ 36609538 (+)
trnap-agg-147 NA coding upstream 196397 36608065 ~ 36608136 (+)
trnap-agg-146 NA coding upstream 199201 36605261 ~ 36605332 (+)
LOC110531983 NA coding downstream 130247 36935061 ~ 36937214 (+)
adtrp1 LOC106571895 coding downstream 133034 36937848 ~ 36942240 (+)
LOC110531160 LOC106571896 coding downstream 136695 36941509 ~ 36953375 (+)
LOC110531987 LOC106571899 coding downstream 156501 36961315 ~ 36970867 (+)
LOC118966039 NA coding downstream 225946 37030760 ~ 37063684 (+)
G799341 NA non-coding upstream 46 36804262 ~ 36804487 (+)
G799331 NA non-coding upstream 14433 36789804 ~ 36790100 (+)
G799329 NA non-coding upstream 17232 36786967 ~ 36787301 (+)
G799326 NA non-coding upstream 20126 36784198 ~ 36784407 (+)
G799270 NA non-coding upstream 111229 36692985 ~ 36693304 (+)
G799347 NA non-coding downstream 15236 36820050 ~ 36820601 (+)
G799457 LOC106571893 non-coding downstream 23085 36827899 ~ 36833763 (+)
G799536 NA non-coding downstream 174707 36979521 ~ 36979856 (+)
G799573 NA non-coding downstream 217408 37022222 ~ 37022581 (+)
G799590 NA non-coding downstream 220813 37025627 ~ 37025884 (+)
G799053 NA other upstream 487728 36313129 ~ 36316805 (+)
G797932 pphln other upstream 1432385 35364988 ~ 35372148 (+)
G797056 NA other upstream 2247911 34555931 ~ 34556622 (+)
G796495 LOC106613263 other upstream 2682793 34121422 ~ 34121740 (+)
G794886 LOC106577459 other upstream 4217145 32583606 ~ 32587388 (+)
G799578 LOC106571900 other downstream 229604 37034418 ~ 37035918 (+)
G799858 LOC106571908 other downstream 762431 37567245 ~ 37570411 (+)
G800834 NA other downstream 1265402 38070216 ~ 38071433 (+)
G801778 NA other downstream 1983247 38788061 ~ 38788354 (+)
G801851 NA other downstream 2128138 38932952 ~ 38933868 (+)

Expression


Co-expression Network