G799578 (LOC106571900)


Basic Information

Item Value
gene id G799578
gene name LOC106571900
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 37034418 ~ 37035918 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU910049
TCAAACAGTTTGTGTAGTTTTAgttaaaaaatacaataatttgcaGCTTACAAAACCAGCAGAAATATGATACATCCAGGCATAATGTGTCTGAATAATACACAGGTACAAATACATGTCATAATATACTGTGATATTAAATTAGCATAGTGGTACAAAATTCTTCAAGAGGATAGAAGGGAACAGCAGCATAAGGGATTAAAAAAAAAGAGATAAAATGGTCATTTGGAGTGAGGCACTGATGCTGTAACTTTTTGACTGACAACACAACCTGTCTTAGTGGGTTAAAGACACTCTAGACGAGGGGTCAGCAACATCCGGCCCGCGAGCCAAAACCATCCCGCAAGTGAtttagtaaaaaaaatacaattaggAAATGTATTCCCAATAGGGTTCCAAAATCCCTGatcaTCAATGTGTTATGAAATTGGGCAACTGGTATGATTATTGAAGTTGACTGACTTATTGTCAAAATTCATACTGTCCATTGAGGGGTATGGGGTCAGAGGGGAACTGGCTGTCCATTAGGGATGTGGGTAGGAGCAAGGGGAGGCTGGGGGCCAGTCTGTTAGAGTGAGTTGGCTGTGATGAAGACGTAGAGCCTGGCCAGGAACGTAGTGAAGGTGCCCTGTCTCCACAGCTTCATCTCCACGTCAATCAGGAAGTCCCGGGGCTCATGGACCTGCCTGTGCAGGTACACTGCGCCTGTGTAGGCATTCAGCTTCCGCGTGCTAAAGTAGTTATCCTCATTGCCCTGGGTGATGCTGATGATGACATTGTCCCCGGAGTAGGCAGGGGAGGGGCCAATGCGGAAGATCTGGGCAGGGATGACTATGTTGGTCTGGAAGCTCAGGTGGTAGTAGGTGATCCTCAGGGGAGAGTTCTGACAGTCCAGGAAGTTGGGGCAGCTCAGTCgtt

Function

NR:

description
fibulin-2-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU910049 True 918 TUCP 0.46 3 37034418 37035918

Neighbor

gene id symbol gene type direction distance location
LOC110531987 LOC106571899 coding upstream 63551 36961315 ~ 36970867 (+)
LOC110531160 LOC106571896 coding upstream 81043 36941509 ~ 36953375 (+)
adtrp1 LOC106571895 coding upstream 92178 36937848 ~ 36942240 (+)
LOC110531983 NA coding upstream 97204 36935061 ~ 36937214 (+)
trnap-agg-150 NA coding upstream 422075 36612272 ~ 36612343 (+)
nup210 LOC106571901 coding downstream 66721 37102639 ~ 37166005 (+)
iqsec1a LOC106571902 coding downstream 143972 37179890 ~ 37360016 (+)
gp9 LOC106571903 coding downstream 326110 37362028 ~ 37364848 (+)
raf1a LOC106571905 coding downstream 344031 37379949 ~ 37424276 (+)
LOC110531997 LOC106571907 coding downstream 474625 37510543 ~ 37516918 (+)
G799590 NA non-coding upstream 8534 37025627 ~ 37025884 (+)
G799573 NA non-coding upstream 11837 37022222 ~ 37022581 (+)
G799536 NA non-coding upstream 54562 36979521 ~ 36979856 (+)
G799457 LOC106571893 non-coding upstream 200655 36827899 ~ 36833763 (+)
G799347 NA non-coding upstream 213817 36820050 ~ 36820601 (+)
G799582 LOC106571900 non-coding downstream 10800 37046718 ~ 37048303 (+)
G799626 NA non-coding downstream 58838 37094756 ~ 37094961 (+)
G799630 NA non-coding downstream 64379 37100297 ~ 37100529 (+)
G799762 NA non-coding downstream 337241 37373159 ~ 37377209 (+)
G799779 NA non-coding downstream 379789 37415707 ~ 37417325 (+)
G799053 NA other upstream 717613 36313129 ~ 36316805 (+)
G797932 pphln other upstream 1662270 35364988 ~ 35372148 (+)
G797056 NA other upstream 2477796 34555931 ~ 34556622 (+)
G796495 LOC106613263 other upstream 2912678 34121422 ~ 34121740 (+)
G794886 LOC106577459 other upstream 4447030 32583606 ~ 32587388 (+)
G799858 LOC106571908 other downstream 531327 37567245 ~ 37570411 (+)
G800834 NA other downstream 1034298 38070216 ~ 38071433 (+)
G801778 NA other downstream 1752143 38788061 ~ 38788354 (+)
G801851 NA other downstream 1897034 38932952 ~ 38933868 (+)
LOC110532019 LOC106571933 other downstream 2032454 39064150 ~ 39072385 (+)

Expression


Co-expression Network