G800275


Basic Information

Item Value
gene id G800275
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 37360857 ~ 37361967 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU910816
ttggcattctctcaaccagcttcaccttgaatgcttttccaacagtcttgaatgagttcccacatgctgagcacttgttggctgcttttcattcactctgcagtccaactcatcccaaaccatctcaattgggttgaggtcggggaattgtggaggccaggtcatctgatgcagcactccttcactctccttcttggagaaagtgtgtttggtcattgtcctgttgaaaaacaaatgatggtgccactaatcccaaaccagaagggatggcgtatcgctgcagaatgctgtggtagccatgctggttaagtgtgccttgaattctaaataaatcacagacagtgtcaccagcaaagcacccccacaccataacacctcctcctccatgctttacggtgggaaatacacatgcagagatcatccgttgcatctcacaaaaacacggcggtgggaaccaaaaatctcaaatttagactccagaccaaaggacagatttcaaccggtttaatgtccattgctcgtgtttcttggccaaagcaagtctcttcttcttattggtgtccttcagaaGTGGTTCCTTTGCAGCAATGCGACCCTGAAGGCCTGAGTCACACAtcctcctctgaacaattgatgttgataTTTGTCTGTTCCTTGaactgaagcatttatttgggctgcaatttctgagactggtaactctaatgatcttatcctctgcagcagaggtaactatgggttttcctttcctgtggcggtcctcatgagagccagtttcatcatagcgcttgacagtttttgcgactgcactttcaaagttcttgaaattttccatattgactgaccttcatgtcttaaagtaatggactgtcctttctctttgcttatttgagatgtaccaaatagggatatcttctgtatacccccctaccttgtcacaacataactgattggctcaaacgcattaagaaggaaataaattccacaaattaacttttaagaaggcgcacctgttaattgaaatgcattccaggtgactacctcatgaagctggttgagagaatgccaagagtgtgcaaagct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU910816 True 1083 lncRNA 0.44 2 37360857 37361967

Neighbor

gene id symbol gene type direction distance location
LOC110531988 LOC106571900 coding downstream 279088 37034299 ~ 37081769 (-)
fbxw12 fbxw12 coding downstream 396937 36953521 ~ 36963920 (-)
LOC110531982 LOC106571893 coding downstream 453157 36827882 ~ 36907700 (-)
LOC110531981 LOC106571892 coding downstream 540264 36721987 ~ 36820593 (-)
LOC110531980 LOC106571891 coding downstream 671686 36681295 ~ 36689171 (-)
LOC110531992 LOC106571904 coding upstream 3710 37365677 ~ 37372883 (-)
cnbpa cnbp coding upstream 11253 37373220 ~ 37377288 (-)
LOC100505416 pparg coding upstream 67926 37429893 ~ 37436194 (-)
LOC110531996 LOC100136520 coding upstream 79592 37441559 ~ 37476549 (-)
LOC110531998 LOC106571908 coding upstream 205245 37567212 ~ 37581804 (-)
G800276 LOC106571902 non-coding downstream 133 37356933 ~ 37360724 (-)
G800155 NA non-coding downstream 139862 37135664 ~ 37220995 (-)
G800088 NA non-coding downstream 336086 37024007 ~ 37024771 (-)
G800024 NA non-coding downstream 469308 36891045 ~ 36891549 (-)
G800334 NA non-coding upstream 23423 37385390 ~ 37386330 (-)
G800358 NA non-coding upstream 52968 37414935 ~ 37417799 (-)
G800389 NA non-coding upstream 115760 37477727 ~ 37526430 (-)
G800411 NA non-coding upstream 151182 37513149 ~ 37516432 (-)
G800416 NA non-coding upstream 164775 37526742 ~ 37527090 (-)
G800318 NA other downstream 15710 37344395 ~ 37345147 (-)
G798993 NA other downstream 1210220 36150338 ~ 36150637 (-)
LOC110531979 brpf1 other downstream 1381742 35948544 ~ 35979307 (-)
LOC118966032 LOC106571870 other downstream 1839525 35492026 ~ 35521884 (-)
LOC110532015 LOC106566767 other upstream 1479242 38839265 ~ 38841685 (-)
G802100 NA other upstream 1604489 38966456 ~ 38996032 (-)
G802138 NA other upstream 1688563 39050530 ~ 39061381 (-)
G802149 LOC106581475 other upstream 1712514 39074481 ~ 39074720 (-)
G802602 LOC106571943 other upstream 2018783 39380750 ~ 39383210 (-)

Expression


Co-expression Network