G799785


Basic Information

Item Value
gene id G799785
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 37438691 ~ 37438943 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU910271
acacaattcatggagactgaaaatgtcctagttcttccatgacctgccaGACATGTCAGTCATTGAgcgtgtttgggatgctctggatcaacgtgtaccaTGTACCTGCCAACATCAAGAAACTTCGCACAACCATTGCAGAGGactgggacaacatttcacaggccacaatcaacagcctgatcaactttacGCTAAGGAGAAGGCAAACGGTGGTTACACCAGATGCTGACtggtttctgatccacgcccc

Function

NR:

description
PREDICTED: tRNA:m(4)X modification enzyme TRM13 homolog isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU910271 True 253 lncRNA 0.48 1 37438691 37438943

Neighbor

gene id symbol gene type direction distance location
raf1a LOC106571905 coding upstream 14415 37379949 ~ 37424276 (+)
gp9 LOC106571903 coding upstream 73843 37362028 ~ 37364848 (+)
iqsec1a LOC106571902 coding upstream 78675 37179890 ~ 37360016 (+)
nup210 LOC106571901 coding upstream 272686 37102639 ~ 37166005 (+)
LOC118966039 NA coding upstream 375007 37030760 ~ 37063684 (+)
LOC110531997 LOC106571907 coding downstream 71600 37510543 ~ 37516918 (+)
tnnc1a LOC106571909 coding downstream 166258 37605201 ~ 37610174 (+)
LOC110517304 LOC106571911 coding downstream 227399 37666342 ~ 37717107 (+)
LOC110532004 LOC106571913 coding downstream 282123 37721066 ~ 37729844 (+)
LOC110532006 LOC106571916 coding downstream 424737 37863680 ~ 37905930 (+)
G799780 NA non-coding upstream 20627 37416551 ~ 37418064 (+)
G799779 NA non-coding upstream 21366 37415707 ~ 37417325 (+)
G799762 NA non-coding upstream 61482 37373159 ~ 37377209 (+)
G799630 NA non-coding upstream 338162 37100297 ~ 37100529 (+)
G799626 NA non-coding upstream 343730 37094756 ~ 37094961 (+)
G799789 NA non-coding downstream 6201 37445144 ~ 37446422 (+)
G799837 NA non-coding downstream 91074 37530017 ~ 37530463 (+)
G799863 NA non-coding downstream 143234 37582177 ~ 37582635 (+)
G799895 LOC105029132 non-coding downstream 189911 37628854 ~ 37630852 (+)
G799983 NA non-coding downstream 344382 37783325 ~ 37783538 (+)
G799578 LOC106571900 other upstream 402773 37034418 ~ 37035918 (+)
G799053 NA other upstream 1121886 36313129 ~ 36316805 (+)
G797932 pphln other upstream 2066543 35364988 ~ 35372148 (+)
G797056 NA other upstream 2882069 34555931 ~ 34556622 (+)
G796495 LOC106613263 other upstream 3316951 34121422 ~ 34121740 (+)
G799858 LOC106571908 other downstream 128302 37567245 ~ 37570411 (+)
G800834 NA other downstream 631273 38070216 ~ 38071433 (+)
G801778 NA other downstream 1349118 38788061 ~ 38788354 (+)
G801851 NA other downstream 1494009 38932952 ~ 38933868 (+)
LOC110532019 LOC106571933 other downstream 1629429 39064150 ~ 39072385 (+)

Expression


Co-expression Network