G799789


Basic Information

Item Value
gene id G799789
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 37445144 ~ 37446422 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU910275
TAAGTTACCATAAAAACAacaggacttttttttttttttttacagtagtcTATTGTAATTGTGTAAGTTATCTAATATGCTTGTCCTCATACACATGAAAACAGCTATGGCTGTGTTCTGTGCATAAGAGACAGGTTAATAAACTGTCAAAGAACTGTCTTTCTAAGCGTTGGTTGTTATAGCAACATTCACTGATGGAAGTATCTTGATGGGTAAGCTATCTGCTAATAATGGACAAAGACAAATCTATATATCATGTCCTTTCAAACAACGCATGGAATGAAAGTTTACATAGCAGTGATCTGGCTGGCTGTATGGCTCTAACATTTGGTTGTTTATGCATACATCTATGTTGTTTAACTTTTACAATATGCATTTGTTATGACACATTCACAATGCATAAATCACAAGGAACATAGTTTGGATCAAAAGAATAATAGTGGTGTCACTAAAGAAACATCCAGAATGAGAAGGGAAAAAAAACATACTGTTACCTGCCTGAATATCATTCatgcaaaacaaaaataaatatctATTATATTAGTATATGTATGAAAATAATTACCACTACAGTCATACGCACCAACATGTACATATTGACATATACACAAACGTCAAACTGCACAACAAACCACAGTTTGAACAATATCTAAAAGTACACACCAAAATGGAGaaataaatgggggggggggggggggggggggggggtagagggagggcaAATAATGAATAATGACTGAATCAAACATTGGGCACACACAGCAGCACTGGACTCAGTGTAGGCACAATCTGCTTATTACACTGTCAACAACAGCCCCAAAGAACCACGGCTACAGAGAAACAGAGGCGACCGTTACAAGCACACTAAATCAACAGGGAAACACGTTAACAGTACATCTTGACACTGCATAGAGGAAAAACACAGTCCAGGCCAGCACTACACTCTGGCCCAAACTAATACCAGCCAGATCTCAGTTCGTCTACCGTCTCTCCCCCCAACACCCTCCCCGCTTGTGTCCAGCTAATGTACGTCATCATCATTTCGATATTAGATAGACTTCCTCCCTGGCGGGCTACTCAGTTGGCCTGAACGGGTTTTGGCCCCACTGCAACGCCATTACAGTCGAGAATGTACTGCAGACAACCTTGAGGAGGGTGTGCAGTGCCAGTCTTGGGATCAACCACGAGGTCCTTCTGGCCACCACTCTGCAAACACACGAAACACAGTGATACTCCCAGGGACACTACAGTAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU910275 True 1253 lncRNA 0.41 2 37445144 37446422

Neighbor

gene id symbol gene type direction distance location
raf1a LOC106571905 coding upstream 20868 37379949 ~ 37424276 (+)
gp9 LOC106571903 coding upstream 80296 37362028 ~ 37364848 (+)
iqsec1a LOC106571902 coding upstream 85128 37179890 ~ 37360016 (+)
nup210 LOC106571901 coding upstream 279139 37102639 ~ 37166005 (+)
LOC118966039 NA coding upstream 381460 37030760 ~ 37063684 (+)
LOC110531997 LOC106571907 coding downstream 64121 37510543 ~ 37516918 (+)
tnnc1a LOC106571909 coding downstream 158779 37605201 ~ 37610174 (+)
LOC110517304 LOC106571911 coding downstream 219920 37666342 ~ 37717107 (+)
LOC110532004 LOC106571913 coding downstream 274644 37721066 ~ 37729844 (+)
LOC110532006 LOC106571916 coding downstream 417258 37863680 ~ 37905930 (+)
G799785 NA non-coding upstream 6201 37438691 ~ 37438943 (+)
G799780 NA non-coding upstream 27080 37416551 ~ 37418064 (+)
G799779 NA non-coding upstream 27819 37415707 ~ 37417325 (+)
G799762 NA non-coding upstream 67935 37373159 ~ 37377209 (+)
G799630 NA non-coding upstream 344615 37100297 ~ 37100529 (+)
G799837 NA non-coding downstream 83595 37530017 ~ 37530463 (+)
G799863 NA non-coding downstream 135755 37582177 ~ 37582635 (+)
G799895 LOC105029132 non-coding downstream 182432 37628854 ~ 37630852 (+)
G799983 NA non-coding downstream 336903 37783325 ~ 37783538 (+)
G799984 NA non-coding downstream 337586 37784008 ~ 37784214 (+)
G799578 LOC106571900 other upstream 409226 37034418 ~ 37035918 (+)
G799053 NA other upstream 1128339 36313129 ~ 36316805 (+)
G797932 pphln other upstream 2072996 35364988 ~ 35372148 (+)
G797056 NA other upstream 2888522 34555931 ~ 34556622 (+)
G796495 LOC106613263 other upstream 3323404 34121422 ~ 34121740 (+)
G799858 LOC106571908 other downstream 120823 37567245 ~ 37570411 (+)
G800834 NA other downstream 623794 38070216 ~ 38071433 (+)
G801778 NA other downstream 1341639 38788061 ~ 38788354 (+)
G801851 NA other downstream 1486530 38932952 ~ 38933868 (+)
LOC110532019 LOC106571933 other downstream 1621950 39064150 ~ 39072385 (+)

Expression


Co-expression Network