Gene
RNA
| Item | Value |
|---|---|
| gene id | G800416 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 37526742 ~ 37527090 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: protein LDOC1L-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU910970 | True | 349 | lncRNA | 0.54 | 1 | 37526742 | 37527090 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110531996 | LOC100136520 | coding | downstream | 50193 | 37441559 ~ 37476549 (-) |
| LOC100505416 | pparg | coding | downstream | 90548 | 37429893 ~ 37436194 (-) |
| cnbpa | cnbp | coding | downstream | 149454 | 37373220 ~ 37377288 (-) |
| LOC110531992 | LOC106571904 | coding | downstream | 153859 | 37365677 ~ 37372883 (-) |
| LOC110531988 | LOC106571900 | coding | downstream | 444973 | 37034299 ~ 37081769 (-) |
| LOC110531998 | LOC106571908 | coding | upstream | 40122 | 37567212 ~ 37581804 (-) |
| LOC110532001 | LOC106571910 | coding | upstream | 101688 | 37628778 ~ 37634142 (-) |
| LOC110531161 | NA | coding | upstream | 111322 | 37638412 ~ 37641906 (-) |
| LOC110532003 | LOC106571912 | coding | upstream | 202900 | 37729990 ~ 37770397 (-) |
| LOC110531162 | LOC106571919 | coding | upstream | 421650 | 37948740 ~ 37953210 (-) |
| G800389 | NA | non-coding | downstream | 312 | 37477727 ~ 37526430 (-) |
| G800411 | NA | non-coding | downstream | 10310 | 37513149 ~ 37516432 (-) |
| G800358 | NA | non-coding | downstream | 108943 | 37414935 ~ 37417799 (-) |
| G800334 | NA | non-coding | downstream | 140412 | 37385390 ~ 37386330 (-) |
| G800274 | NA | non-coding | downstream | 161895 | 37295620 ~ 37364847 (-) |
| G800436 | NA | non-coding | upstream | 36788 | 37563878 ~ 37564091 (-) |
| G800438 | LOC106571909 | non-coding | upstream | 78152 | 37605242 ~ 37610295 (-) |
| G800503 | NA | non-coding | upstream | 161070 | 37688160 ~ 37746372 (-) |
| G800553 | NA | non-coding | upstream | 244830 | 37771920 ~ 37772129 (-) |
| G800318 | NA | other | downstream | 181595 | 37344395 ~ 37345147 (-) |
| LOC110531982 | LOC106571893 | other | downstream | 619094 | 36827882 ~ 36907700 (-) |
| G798993 | NA | other | downstream | 1376105 | 36150338 ~ 36150637 (-) |
| LOC110531979 | brpf1 | other | downstream | 1547627 | 35948544 ~ 35979307 (-) |
| LOC118966032 | LOC106571870 | other | downstream | 2005410 | 35492026 ~ 35521884 (-) |
| LOC110532015 | LOC106566767 | other | upstream | 1314119 | 38839265 ~ 38841685 (-) |
| G802100 | NA | other | upstream | 1439366 | 38966456 ~ 38996032 (-) |
| G802138 | NA | other | upstream | 1523440 | 39050530 ~ 39061381 (-) |
| G802149 | LOC106581475 | other | upstream | 1547391 | 39074481 ~ 39074720 (-) |
| G802602 | LOC106571943 | other | upstream | 1853660 | 39380750 ~ 39383210 (-) |
