G799837


Basic Information

Item Value
gene id G799837
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 37530017 ~ 37530463 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU910326
gcccacaactcgcttccttcgtctgcgaccgggctatctccttttcagagtagcctcgggtaccagcctccgctgttctcatctcagttcgccgagtccagcgtcccctccgctcaggcttttgtccaacgttgcgagcgcacctggaagagggtcaggtctgcactttgccgttataggacgcagactgtgagggctgctaataagcgaagaactaagagtcctagatattgtcgcggtcagagagtttggctctccactcagaaccttccccttaagacggcttctcgcaagttgaccccgcggttcattggtccgttccgtatttctcgggtcattaatcctgtcgcagttcgacttcttcttccgcgataccttcgtcgcgtccacccggtcttccatgtctcctgtattaagcccgttcttcgcgcccccgctcgtctcccc

Function

NR:

description
PREDICTED: uncharacterized protein LOC107670948

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU910326 True 447 lncRNA 0.57 1 37530017 37530463

Neighbor

gene id symbol gene type direction distance location
LOC110531997 LOC106571907 coding upstream 13099 37510543 ~ 37516918 (+)
raf1a LOC106571905 coding upstream 105741 37379949 ~ 37424276 (+)
gp9 LOC106571903 coding upstream 165169 37362028 ~ 37364848 (+)
iqsec1a LOC106571902 coding upstream 170001 37179890 ~ 37360016 (+)
nup210 LOC106571901 coding upstream 364012 37102639 ~ 37166005 (+)
tnnc1a LOC106571909 coding downstream 74738 37605201 ~ 37610174 (+)
LOC110517304 LOC106571911 coding downstream 135879 37666342 ~ 37717107 (+)
LOC110532004 LOC106571913 coding downstream 190603 37721066 ~ 37729844 (+)
LOC110532006 LOC106571916 coding downstream 333217 37863680 ~ 37905930 (+)
LOC110532007 LOC106571918 coding downstream 393409 37923872 ~ 37948962 (+)
G799789 NA non-coding upstream 83595 37445144 ~ 37446422 (+)
G799785 NA non-coding upstream 91074 37438691 ~ 37438943 (+)
G799780 NA non-coding upstream 111953 37416551 ~ 37418064 (+)
G799779 NA non-coding upstream 112692 37415707 ~ 37417325 (+)
G799762 NA non-coding upstream 152808 37373159 ~ 37377209 (+)
G799863 NA non-coding downstream 51714 37582177 ~ 37582635 (+)
G799895 LOC105029132 non-coding downstream 98391 37628854 ~ 37630852 (+)
G799983 NA non-coding downstream 252862 37783325 ~ 37783538 (+)
G799984 NA non-coding downstream 253545 37784008 ~ 37784214 (+)
G799985 NA non-coding downstream 253966 37784429 ~ 37784956 (+)
G799578 LOC106571900 other upstream 494099 37034418 ~ 37035918 (+)
G799053 NA other upstream 1213212 36313129 ~ 36316805 (+)
G797932 pphln other upstream 2157869 35364988 ~ 35372148 (+)
G797056 NA other upstream 2973395 34555931 ~ 34556622 (+)
G796495 LOC106613263 other upstream 3408277 34121422 ~ 34121740 (+)
G799858 LOC106571908 other downstream 36782 37567245 ~ 37570411 (+)
G800834 NA other downstream 539753 38070216 ~ 38071433 (+)
G801778 NA other downstream 1257598 38788061 ~ 38788354 (+)
G801851 NA other downstream 1402489 38932952 ~ 38933868 (+)
LOC110532019 LOC106571933 other downstream 1537909 39064150 ~ 39072385 (+)

Expression


Co-expression Network