Gene
RNA
| Item | Value |
|---|---|
| gene id | G799863 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 37582177 ~ 37582635 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU910353 | True | 338 | lncRNA | 0.36 | 2 | 37582177 | 37582635 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110531997 | LOC106571907 | coding | upstream | 65259 | 37510543 ~ 37516918 (+) |
| raf1a | LOC106571905 | coding | upstream | 157901 | 37379949 ~ 37424276 (+) |
| gp9 | LOC106571903 | coding | upstream | 217329 | 37362028 ~ 37364848 (+) |
| iqsec1a | LOC106571902 | coding | upstream | 222161 | 37179890 ~ 37360016 (+) |
| nup210 | LOC106571901 | coding | upstream | 416172 | 37102639 ~ 37166005 (+) |
| tnnc1a | LOC106571909 | coding | downstream | 22566 | 37605201 ~ 37610174 (+) |
| LOC110517304 | LOC106571911 | coding | downstream | 83707 | 37666342 ~ 37717107 (+) |
| LOC110532004 | LOC106571913 | coding | downstream | 138431 | 37721066 ~ 37729844 (+) |
| LOC110532006 | LOC106571916 | coding | downstream | 281045 | 37863680 ~ 37905930 (+) |
| LOC110532007 | LOC106571918 | coding | downstream | 341237 | 37923872 ~ 37948962 (+) |
| G799837 | NA | non-coding | upstream | 51714 | 37530017 ~ 37530463 (+) |
| G799789 | NA | non-coding | upstream | 135755 | 37445144 ~ 37446422 (+) |
| G799785 | NA | non-coding | upstream | 143234 | 37438691 ~ 37438943 (+) |
| G799780 | NA | non-coding | upstream | 164113 | 37416551 ~ 37418064 (+) |
| G799779 | NA | non-coding | upstream | 164852 | 37415707 ~ 37417325 (+) |
| G799895 | LOC105029132 | non-coding | downstream | 46219 | 37628854 ~ 37630852 (+) |
| G799983 | NA | non-coding | downstream | 200690 | 37783325 ~ 37783538 (+) |
| G799984 | NA | non-coding | downstream | 201373 | 37784008 ~ 37784214 (+) |
| G799985 | NA | non-coding | downstream | 201794 | 37784429 ~ 37784956 (+) |
| G800563 | NA | non-coding | downstream | 213985 | 37796620 ~ 37796857 (+) |
| G799858 | LOC106571908 | other | upstream | 11766 | 37567245 ~ 37570411 (+) |
| G799578 | LOC106571900 | other | upstream | 546259 | 37034418 ~ 37035918 (+) |
| G799053 | NA | other | upstream | 1265372 | 36313129 ~ 36316805 (+) |
| G797932 | pphln | other | upstream | 2210029 | 35364988 ~ 35372148 (+) |
| G797056 | NA | other | upstream | 3025555 | 34555931 ~ 34556622 (+) |
| G800834 | NA | other | downstream | 487581 | 38070216 ~ 38071433 (+) |
| G801778 | NA | other | downstream | 1205426 | 38788061 ~ 38788354 (+) |
| G801851 | NA | other | downstream | 1350317 | 38932952 ~ 38933868 (+) |
| LOC110532019 | LOC106571933 | other | downstream | 1485737 | 39064150 ~ 39072385 (+) |
| LOC110531165 | LOC106571934 | other | downstream | 1650430 | 39111355 ~ 39237408 (+) |
