Gene
RNA
| Item | Value |
|---|---|
| gene id | G800553 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 37771920 ~ 37772129 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU911120 | True | 210 | lncRNA | 0.52 | 1 | 37771920 | 37772129 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110532003 | LOC106571912 | coding | downstream | 1523 | 37729990 ~ 37770397 (-) |
| LOC110531161 | NA | coding | downstream | 130014 | 37638412 ~ 37641906 (-) |
| LOC110532001 | LOC106571910 | coding | downstream | 137778 | 37628778 ~ 37634142 (-) |
| LOC110531998 | LOC106571908 | coding | downstream | 190116 | 37567212 ~ 37581804 (-) |
| LOC110531996 | LOC100136520 | coding | downstream | 295371 | 37441559 ~ 37476549 (-) |
| LOC110531162 | LOC106571919 | coding | upstream | 176611 | 37948740 ~ 37953210 (-) |
| LOC110531163 | LOC102784363 | coding | upstream | 181481 | 37953610 ~ 37961387 (-) |
| LOC110532008 | LOC106571920 | coding | upstream | 189010 | 37961139 ~ 37977349 (-) |
| LOC110532012 | cdh4 | coding | upstream | 280586 | 38052715 ~ 38440830 (-) |
| LOC110532016 | NA | coding | upstream | 773075 | 38545204 ~ 38548047 (-) |
| G800503 | NA | non-coding | downstream | 25548 | 37688160 ~ 37746372 (-) |
| G800438 | LOC106571909 | non-coding | downstream | 161625 | 37605242 ~ 37610295 (-) |
| G800436 | NA | non-coding | downstream | 207829 | 37563878 ~ 37564091 (-) |
| G800416 | NA | non-coding | downstream | 244830 | 37526742 ~ 37527090 (-) |
| G800558 | NA | non-coding | upstream | 11877 | 37784006 ~ 37784304 (-) |
| G800559 | NA | non-coding | upstream | 12331 | 37784460 ~ 37785145 (-) |
| G800656 | NA | non-coding | upstream | 53805 | 37825934 ~ 37829157 (-) |
| G800721 | NA | non-coding | upstream | 145406 | 37917535 ~ 37917914 (-) |
| G801084 | NA | non-coding | upstream | 208214 | 37980343 ~ 37980543 (-) |
| G800318 | NA | other | downstream | 426773 | 37344395 ~ 37345147 (-) |
| LOC110531982 | LOC106571893 | other | downstream | 864272 | 36827882 ~ 36907700 (-) |
| G798993 | NA | other | downstream | 1621283 | 36150338 ~ 36150637 (-) |
| LOC110531979 | brpf1 | other | downstream | 1792805 | 35948544 ~ 35979307 (-) |
| LOC118966032 | LOC106571870 | other | downstream | 2250588 | 35492026 ~ 35521884 (-) |
| LOC110532015 | LOC106566767 | other | upstream | 1069080 | 38839265 ~ 38841685 (-) |
| G802100 | NA | other | upstream | 1194327 | 38966456 ~ 38996032 (-) |
| G802138 | NA | other | upstream | 1278401 | 39050530 ~ 39061381 (-) |
| G802149 | LOC106581475 | other | upstream | 1302352 | 39074481 ~ 39074720 (-) |
| G802602 | LOC106571943 | other | upstream | 1608621 | 39380750 ~ 39383210 (-) |
