G799985


Basic Information

Item Value
gene id G799985
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 37784429 ~ 37784956 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU910497
agtaatcttcaggtgcgggcattttctcctgggattcaggagagaaagcacacttccacgaacgatatatcatcgaagagatatgtgaaaaacaccttgaggattgattctaaacaacgtttgccatgttttcagtcgatattatggagttaatttggaaaaaagtttgcgttttgaggactgaattttcgtttttttttggtagccaaatgtgatgtacaaaacggagctatttctaatacacaaagaatctttttggaaaaactgagcatctgctatctaactgagagtctcctcattgaaaacatctgaagttcttcaaaggtaaatgattttatttgaaggcttttatgtttttgttgaaatgttgcgtgctggatgctaacgctaatgctaacgctaaatgctaacgctaaatgctaacgctagctagctacttttacacaaatgattgttttcctatggttgagaagcatattttgaaaatctgagatgacagtgttgtttacaaaaggctaagcttgagag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU910497 True 528 lncRNA 0.36 1 37784429 37784956

Neighbor

gene id symbol gene type direction distance location
LOC110532004 LOC106571913 coding upstream 54585 37721066 ~ 37729844 (+)
LOC110517304 LOC106571911 coding upstream 67322 37666342 ~ 37717107 (+)
tnnc1a LOC106571909 coding upstream 174255 37605201 ~ 37610174 (+)
LOC110531997 LOC106571907 coding upstream 267511 37510543 ~ 37516918 (+)
raf1a LOC106571905 coding upstream 360153 37379949 ~ 37424276 (+)
LOC110532006 LOC106571916 coding downstream 78724 37863680 ~ 37905930 (+)
LOC110532007 LOC106571918 coding downstream 138916 37923872 ~ 37948962 (+)
LOC110532009 LOC106571922 coding downstream 192468 37977424 ~ 37979829 (+)
LOC110532011 LOC106571923 coding downstream 236725 38021681 ~ 38033223 (+)
LOC110532014 LOC106571929 coding downstream 1083313 38868269 ~ 38884647 (+)
G799984 NA non-coding upstream 215 37784008 ~ 37784214 (+)
G799983 NA non-coding upstream 891 37783325 ~ 37783538 (+)
G799895 LOC105029132 non-coding upstream 153577 37628854 ~ 37630852 (+)
G799863 NA non-coding upstream 201794 37582177 ~ 37582635 (+)
G799837 NA non-coding upstream 253966 37530017 ~ 37530463 (+)
G800563 NA non-coding downstream 11664 37796620 ~ 37796857 (+)
G800566 NA non-coding downstream 15207 37800163 ~ 37800448 (+)
G800576 NA non-coding downstream 21010 37805966 ~ 37806255 (+)
G800583 NA non-coding downstream 29489 37814445 ~ 37814858 (+)
G800589 NA non-coding downstream 41023 37825979 ~ 37829233 (+)
G799858 LOC106571908 other upstream 214018 37567245 ~ 37570411 (+)
G799578 LOC106571900 other upstream 748511 37034418 ~ 37035918 (+)
G799053 NA other upstream 1467624 36313129 ~ 36316805 (+)
G797932 pphln other upstream 2412281 35364988 ~ 35372148 (+)
G797056 NA other upstream 3227807 34555931 ~ 34556622 (+)
G800834 NA other downstream 285260 38070216 ~ 38071433 (+)
G801778 NA other downstream 1003105 38788061 ~ 38788354 (+)
G801851 NA other downstream 1147996 38932952 ~ 38933868 (+)
LOC110532019 LOC106571933 other downstream 1283416 39064150 ~ 39072385 (+)
LOC110531165 LOC106571934 other downstream 1448109 39111355 ~ 39237408 (+)

Expression


Co-expression Network