G800559


Basic Information

Item Value
gene id G800559
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 37784460 ~ 37785145 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU911126
agatagcaaatgttcagtttttcttgaaagattatttgtttaggacaaatcgctccgttttctgcgtcacgtttagctatgaaaaaacccctgtatccaggattgtgtaaatctatcagcaagctcattagcataacacaacgttaactattcatgaaaatcgcaaatgaaatgaaataaatatgccatctctcaagcttagccttttgtaaacaacactgtcatctcagattttcaaaatatgcttctcaaccataggaaaacaatcatttgtgtaaaagtagctagctagcgttagcatttagcgttagcatttagcgttagcattagcgttagcatccagcacgcaacatttcaacaaaaacataaaagccttcaaataaaatcatttacctttgaagaacttcagatgttttcaatgaggagactctcagttagatagcagatgctcagtttttccaaaaagattctttgtgtattagaaatagctccgttttgtacatcacatttggctaccaaaaaaaaacgaaaattcagtcctcaaaacgcaaacttttttccaaattaactccataatatcgactgaaaacatggcaaacgttgtttagaatcaatcctcaaggtgtttttcacatatctcttcgatgatatatcgttcgtggaagtgtgctttctctcctgaatcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU911126 True 686 lncRNA 0.35 1 37784460 37785145

Neighbor

gene id symbol gene type direction distance location
LOC110532003 LOC106571912 coding downstream 14063 37729990 ~ 37770397 (-)
LOC110531161 NA coding downstream 142554 37638412 ~ 37641906 (-)
LOC110532001 LOC106571910 coding downstream 150318 37628778 ~ 37634142 (-)
LOC110531998 LOC106571908 coding downstream 202656 37567212 ~ 37581804 (-)
LOC110531996 LOC100136520 coding downstream 307911 37441559 ~ 37476549 (-)
LOC110531162 LOC106571919 coding upstream 163595 37948740 ~ 37953210 (-)
LOC110531163 LOC102784363 coding upstream 168465 37953610 ~ 37961387 (-)
LOC110532008 LOC106571920 coding upstream 175994 37961139 ~ 37977349 (-)
LOC110532012 cdh4 coding upstream 267570 38052715 ~ 38440830 (-)
LOC110532016 NA coding upstream 760059 38545204 ~ 38548047 (-)
G800558 NA non-coding downstream 156 37784006 ~ 37784304 (-)
G800553 NA non-coding downstream 12331 37771920 ~ 37772129 (-)
G800503 NA non-coding downstream 38088 37688160 ~ 37746372 (-)
G800438 LOC106571909 non-coding downstream 174165 37605242 ~ 37610295 (-)
G800656 NA non-coding upstream 40789 37825934 ~ 37829157 (-)
G800721 NA non-coding upstream 132390 37917535 ~ 37917914 (-)
G801084 NA non-coding upstream 195198 37980343 ~ 37980543 (-)
G801086 NA non-coding upstream 197151 37982296 ~ 37983117 (-)
G801091 NA non-coding upstream 203490 37988635 ~ 37989366 (-)
G800318 NA other downstream 439313 37344395 ~ 37345147 (-)
LOC110531982 LOC106571893 other downstream 876812 36827882 ~ 36907700 (-)
G798993 NA other downstream 1633823 36150338 ~ 36150637 (-)
LOC110531979 brpf1 other downstream 1805345 35948544 ~ 35979307 (-)
LOC118966032 LOC106571870 other downstream 2263128 35492026 ~ 35521884 (-)
LOC110532015 LOC106566767 other upstream 1056064 38839265 ~ 38841685 (-)
G802100 NA other upstream 1181311 38966456 ~ 38996032 (-)
G802138 NA other upstream 1265385 39050530 ~ 39061381 (-)
G802149 LOC106581475 other upstream 1289336 39074481 ~ 39074720 (-)
G802602 LOC106571943 other upstream 1595605 39380750 ~ 39383210 (-)

Expression


Co-expression Network