G800576


Basic Information

Item Value
gene id G800576
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 37805966 ~ 37806255 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU911144
ctctcatacacacactctcgcacacacaaacactctctctctcacatacacacactaaactcagcaaaaaaagaaacgccctctcattgtcaactgtgtttattttcagcaaatttaacatgtgtaaatacttgtatgaacataacaagattcaacaactgagacataaactgaacaagttccacagacatgtgactaacagaaattgaataatgtgtccctgaacaaattggggtcaaaatcaaaagtaacagtcagtatctgatgtggccaccagctgcattaagtac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU911144 True 290 lncRNA 0.38 1 37805966 37806255

Neighbor

gene id symbol gene type direction distance location
LOC110532004 LOC106571913 coding upstream 76122 37721066 ~ 37729844 (+)
LOC110517304 LOC106571911 coding upstream 88859 37666342 ~ 37717107 (+)
tnnc1a LOC106571909 coding upstream 195792 37605201 ~ 37610174 (+)
LOC110531997 LOC106571907 coding upstream 289048 37510543 ~ 37516918 (+)
raf1a LOC106571905 coding upstream 381690 37379949 ~ 37424276 (+)
LOC110532006 LOC106571916 coding downstream 57425 37863680 ~ 37905930 (+)
LOC110532007 LOC106571918 coding downstream 117617 37923872 ~ 37948962 (+)
LOC110532009 LOC106571922 coding downstream 171169 37977424 ~ 37979829 (+)
LOC110532011 LOC106571923 coding downstream 215426 38021681 ~ 38033223 (+)
LOC110532014 LOC106571929 coding downstream 1062014 38868269 ~ 38884647 (+)
G800566 NA non-coding upstream 5518 37800163 ~ 37800448 (+)
G800563 NA non-coding upstream 9109 37796620 ~ 37796857 (+)
G799985 NA non-coding upstream 21010 37784429 ~ 37784956 (+)
G799984 NA non-coding upstream 21752 37784008 ~ 37784214 (+)
G799983 NA non-coding upstream 22428 37783325 ~ 37783538 (+)
G800583 NA non-coding downstream 8190 37814445 ~ 37814858 (+)
G800589 NA non-coding downstream 19724 37825979 ~ 37829233 (+)
G800705 NA non-coding downstream 101012 37907267 ~ 37907580 (+)
G800727 NA non-coding downstream 113854 37920109 ~ 37920367 (+)
G800776 NA non-coding downstream 164203 37970458 ~ 37973015 (+)
G799858 LOC106571908 other upstream 235555 37567245 ~ 37570411 (+)
G799578 LOC106571900 other upstream 770048 37034418 ~ 37035918 (+)
G799053 NA other upstream 1489161 36313129 ~ 36316805 (+)
G797932 pphln other upstream 2433818 35364988 ~ 35372148 (+)
G797056 NA other upstream 3249344 34555931 ~ 34556622 (+)
G800834 NA other downstream 263961 38070216 ~ 38071433 (+)
G801778 NA other downstream 981806 38788061 ~ 38788354 (+)
G801851 NA other downstream 1126697 38932952 ~ 38933868 (+)
LOC110532019 LOC106571933 other downstream 1262117 39064150 ~ 39072385 (+)
LOC110531165 LOC106571934 other downstream 1426810 39111355 ~ 39237408 (+)

Expression


Co-expression Network