G800583


Basic Information

Item Value
gene id G800583
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 37814445 ~ 37814858 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU911151
tctctgatcagtcttctccttgtatgagctgaaagtttagagggacggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcctgcacagtgctccttgggatgtttaaagcttgggaaatatttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacttgcctggtgtgttccttgttcttcatgatgctctctgctcttttaacggacctctgagactatcacagtgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaatcattt

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU911151 True 414 lncRNA 0.42 1 37814445 37814858

Neighbor

gene id symbol gene type direction distance location
LOC110532004 LOC106571913 coding upstream 84601 37721066 ~ 37729844 (+)
LOC110517304 LOC106571911 coding upstream 97338 37666342 ~ 37717107 (+)
tnnc1a LOC106571909 coding upstream 204271 37605201 ~ 37610174 (+)
LOC110531997 LOC106571907 coding upstream 297527 37510543 ~ 37516918 (+)
raf1a LOC106571905 coding upstream 390169 37379949 ~ 37424276 (+)
LOC110532006 LOC106571916 coding downstream 48822 37863680 ~ 37905930 (+)
LOC110532007 LOC106571918 coding downstream 109014 37923872 ~ 37948962 (+)
LOC110532009 LOC106571922 coding downstream 162566 37977424 ~ 37979829 (+)
LOC110532011 LOC106571923 coding downstream 206823 38021681 ~ 38033223 (+)
LOC110532014 LOC106571929 coding downstream 1053411 38868269 ~ 38884647 (+)
G800576 NA non-coding upstream 8190 37805966 ~ 37806255 (+)
G800566 NA non-coding upstream 13997 37800163 ~ 37800448 (+)
G800563 NA non-coding upstream 17588 37796620 ~ 37796857 (+)
G799985 NA non-coding upstream 29489 37784429 ~ 37784956 (+)
G799984 NA non-coding upstream 30231 37784008 ~ 37784214 (+)
G800589 NA non-coding downstream 11121 37825979 ~ 37829233 (+)
G800705 NA non-coding downstream 92409 37907267 ~ 37907580 (+)
G800727 NA non-coding downstream 105251 37920109 ~ 37920367 (+)
G800776 NA non-coding downstream 155600 37970458 ~ 37973015 (+)
G800789 NA non-coding downstream 174506 37989364 ~ 37989649 (+)
G799858 LOC106571908 other upstream 244034 37567245 ~ 37570411 (+)
G799578 LOC106571900 other upstream 778527 37034418 ~ 37035918 (+)
G799053 NA other upstream 1497640 36313129 ~ 36316805 (+)
G797932 pphln other upstream 2442297 35364988 ~ 35372148 (+)
G797056 NA other upstream 3257823 34555931 ~ 34556622 (+)
G800834 NA other downstream 255358 38070216 ~ 38071433 (+)
G801778 NA other downstream 973203 38788061 ~ 38788354 (+)
G801851 NA other downstream 1118094 38932952 ~ 38933868 (+)
LOC110532019 LOC106571933 other downstream 1253514 39064150 ~ 39072385 (+)
LOC110531165 LOC106571934 other downstream 1418207 39111355 ~ 39237408 (+)

Expression


Co-expression Network