Gene
RNA
| Item | Value |
|---|---|
| gene id | G800727 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 37920109 ~ 37920367 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU911303 | True | 259 | lncRNA | 0.40 | 1 | 37920109 | 37920367 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110532006 | LOC106571916 | coding | upstream | 14179 | 37863680 ~ 37905930 (+) |
| LOC110532004 | LOC106571913 | coding | upstream | 190265 | 37721066 ~ 37729844 (+) |
| LOC110517304 | LOC106571911 | coding | upstream | 203002 | 37666342 ~ 37717107 (+) |
| tnnc1a | LOC106571909 | coding | upstream | 309935 | 37605201 ~ 37610174 (+) |
| LOC110531997 | LOC106571907 | coding | upstream | 403191 | 37510543 ~ 37516918 (+) |
| LOC110532007 | LOC106571918 | coding | downstream | 3505 | 37923872 ~ 37948962 (+) |
| LOC110532009 | LOC106571922 | coding | downstream | 57057 | 37977424 ~ 37979829 (+) |
| LOC110532011 | LOC106571923 | coding | downstream | 101314 | 38021681 ~ 38033223 (+) |
| LOC110532014 | LOC106571929 | coding | downstream | 947902 | 38868269 ~ 38884647 (+) |
| LOC110532013 | LOC106571930 | coding | downstream | 966257 | 38886624 ~ 38909718 (+) |
| G800705 | NA | non-coding | upstream | 12529 | 37907267 ~ 37907580 (+) |
| G800589 | NA | non-coding | upstream | 90876 | 37825979 ~ 37829233 (+) |
| G800583 | NA | non-coding | upstream | 105251 | 37814445 ~ 37814858 (+) |
| G800576 | NA | non-coding | upstream | 113854 | 37805966 ~ 37806255 (+) |
| G800566 | NA | non-coding | upstream | 119661 | 37800163 ~ 37800448 (+) |
| G800776 | NA | non-coding | downstream | 50091 | 37970458 ~ 37973015 (+) |
| G800789 | NA | non-coding | downstream | 68997 | 37989364 ~ 37989649 (+) |
| G800826 | NA | non-coding | downstream | 129966 | 38050333 ~ 38055272 (+) |
| G800834 | NA | non-coding | downstream | 149849 | 38070216 ~ 38071433 (+) |
| G800996 | NA | non-coding | downstream | 414244 | 38334611 ~ 38337642 (+) |
| G799858 | LOC106571908 | other | upstream | 349698 | 37567245 ~ 37570411 (+) |
| G799578 | LOC106571900 | other | upstream | 884191 | 37034418 ~ 37035918 (+) |
| G799053 | NA | other | upstream | 1603304 | 36313129 ~ 36316805 (+) |
| G797932 | pphln | other | upstream | 2547961 | 35364988 ~ 35372148 (+) |
| G797056 | NA | other | upstream | 3363487 | 34555931 ~ 34556622 (+) |
| G801778 | NA | other | downstream | 867694 | 38788061 ~ 38788354 (+) |
| G801851 | NA | other | downstream | 1012585 | 38932952 ~ 38933868 (+) |
| LOC110532019 | LOC106571933 | other | downstream | 1148005 | 39064150 ~ 39072385 (+) |
| LOC110531165 | LOC106571934 | other | downstream | 1312698 | 39111355 ~ 39237408 (+) |
