G800776


Basic Information

Item Value
gene id G800776
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 37970458 ~ 37973015 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU911357
gtcagtcattgtctctgattgggagccatatttaggtagcctgttttctattgtgttttgtgggtggttgtatcctgtgttagtgttttcaccatacgggactgtttcggttgtttgtttgtacttttgttattttgttcagtgttctgttgatttattaaatatatcattatggacacttaccacactgcacattggtctgatccttgctactcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU911357 True 216 lncRNA 0.38 2 37970458 37973015

Neighbor

gene id symbol gene type direction distance location
LOC110532007 LOC106571918 coding upstream 21496 37923872 ~ 37948962 (+)
LOC110532006 LOC106571916 coding upstream 64528 37863680 ~ 37905930 (+)
LOC110532004 LOC106571913 coding upstream 240614 37721066 ~ 37729844 (+)
LOC110517304 LOC106571911 coding upstream 253351 37666342 ~ 37717107 (+)
tnnc1a LOC106571909 coding upstream 360284 37605201 ~ 37610174 (+)
LOC110532009 LOC106571922 coding downstream 4409 37977424 ~ 37979829 (+)
LOC110532011 LOC106571923 coding downstream 48666 38021681 ~ 38033223 (+)
LOC110532014 LOC106571929 coding downstream 895254 38868269 ~ 38884647 (+)
LOC110532013 LOC106571930 coding downstream 913609 38886624 ~ 38909718 (+)
LOC110532019 LOC106571933 coding downstream 1091135 39064150 ~ 39072385 (+)
G800727 NA non-coding upstream 50091 37920109 ~ 37920367 (+)
G800705 NA non-coding upstream 62878 37907267 ~ 37907580 (+)
G800589 NA non-coding upstream 141225 37825979 ~ 37829233 (+)
G800583 NA non-coding upstream 155600 37814445 ~ 37814858 (+)
G800576 NA non-coding upstream 164203 37805966 ~ 37806255 (+)
G800789 NA non-coding downstream 16349 37989364 ~ 37989649 (+)
G800826 NA non-coding downstream 77318 38050333 ~ 38055272 (+)
G800834 NA non-coding downstream 97201 38070216 ~ 38071433 (+)
G800996 NA non-coding downstream 361596 38334611 ~ 38337642 (+)
G801490 NA non-coding downstream 557156 38530171 ~ 38530414 (+)
G799858 LOC106571908 other upstream 400047 37567245 ~ 37570411 (+)
G799578 LOC106571900 other upstream 934540 37034418 ~ 37035918 (+)
G799053 NA other upstream 1653653 36313129 ~ 36316805 (+)
G797932 pphln other upstream 2598310 35364988 ~ 35372148 (+)
G797056 NA other upstream 3413836 34555931 ~ 34556622 (+)
G801778 NA other downstream 815046 38788061 ~ 38788354 (+)
G801851 NA other downstream 959937 38932952 ~ 38933868 (+)
LOC110531165 LOC106571934 other downstream 1260050 39111355 ~ 39237408 (+)

Expression


Co-expression Network