G801086


Basic Information

Item Value
gene id G801086
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 37982296 ~ 37983117 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU911689
tctctacactcgccagttttagctttagccagcaccatcttcagattagccttaacgccggtagccctgccccctggtaaacagtgtatgatcgctggatgatttgttttaagtctaatactgcgggtaatggagtcgccaatgactagagttttcaatttgtcagagctaatggtgggaagcttcggcgtctcagaccccgtaacgggaggagtagaaaCCAGAGAAGACTctgcctctgactccgactcgctgcttaatggggaaaaccggttgaaagtttctgtcggctgaatgagcgacaccgttgagcgttcctacagcatttccttccagaaaccgtgagaaagttgtccggctgcggggactgtgccaggggatttatactactatctgtacttactggtggcacagacgctgtttcatcctttcctacactgaaattacccttgcctaacgattgcgtctgaagctgggcttgtagcacagctatcctcgccgtaaggcgatcgttctcctgtatattatgagtacagcgactgcaattagaaggcatcatgttaatgttactacttagcttcggctgttggaggtcctgacgaaccgtgtccagataaagcgtccggagtgaaaaagttgagggaaaaaaaactaaaatataaacggtaattaaaaagtaaaaaccgtaaagttgtcaggtagcaaaataggttggcaacaaaacgcacagcaactcgaaaacaagtctgcaagttgtgatcGGAAATGACAAGAGTTTGTTGATTGGTCAGTCATTGGTCAGTTCCACGTCTCTCCATCcag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU911689 True 822 lncRNA 0.47 1 37982296 37983117

Neighbor

gene id symbol gene type direction distance location
LOC110532008 LOC106571920 coding downstream 4947 37961139 ~ 37977349 (-)
LOC110531163 LOC102784363 coding downstream 20909 37953610 ~ 37961387 (-)
LOC110531162 LOC106571919 coding downstream 29086 37948740 ~ 37953210 (-)
LOC110532003 LOC106571912 coding downstream 211899 37729990 ~ 37770397 (-)
LOC110531161 NA coding downstream 340390 37638412 ~ 37641906 (-)
LOC110532012 cdh4 coding upstream 69598 38052715 ~ 38440830 (-)
LOC110532016 NA coding upstream 562087 38545204 ~ 38548047 (-)
LOC110532015 LOC106566767 coding upstream 856148 38839265 ~ 38841685 (-)
LOC110532017 LOC106571931 coding upstream 1013394 38996511 ~ 39019461 (-)
LOC110532021 LOC106571935 coding upstream 1275371 39258488 ~ 39261833 (-)
G801084 NA non-coding downstream 1753 37980343 ~ 37980543 (-)
G800721 NA non-coding downstream 64382 37917535 ~ 37917914 (-)
G800656 NA non-coding downstream 153139 37825934 ~ 37829157 (-)
G800559 NA non-coding downstream 197151 37784460 ~ 37785145 (-)
G800558 NA non-coding downstream 197992 37784006 ~ 37784304 (-)
G801091 NA non-coding upstream 5518 37988635 ~ 37989366 (-)
G801072 NA non-coding upstream 67203 38050320 ~ 38052661 (-)
G801139 NA non-coding upstream 87116 38070233 ~ 38071472 (-)
G801505 NA non-coding upstream 558328 38541445 ~ 38541651 (-)
G801508 NA non-coding upstream 559105 38542222 ~ 38542485 (-)
G800318 NA other downstream 637149 37344395 ~ 37345147 (-)
LOC110531982 LOC106571893 other downstream 1074648 36827882 ~ 36907700 (-)
G798993 NA other downstream 1831659 36150338 ~ 36150637 (-)
LOC110531979 brpf1 other downstream 2003181 35948544 ~ 35979307 (-)
LOC118966032 LOC106571870 other downstream 2460964 35492026 ~ 35521884 (-)
G802100 NA other upstream 983339 38966456 ~ 38996032 (-)
G802138 NA other upstream 1067413 39050530 ~ 39061381 (-)
G802149 LOC106581475 other upstream 1091364 39074481 ~ 39074720 (-)
G802602 LOC106571943 other upstream 1397633 39380750 ~ 39383210 (-)

Expression


Co-expression Network