XLOC_027106 (sult4a1)


Basic Information

Item Value
gene id XLOC_027106
gene name sult4a1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 8797197 ~ 8810740 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00053427
CGGATATCAAATGCGCGCTTTTCTCcacaaatctttttaaaaagcGTTCCCTTCGAGCTTTTTGCGTGCTGTGATCGTTCGAGAGGATGGCGGAAAGCGAGGTGGACACGCCGAGCACTCCGATTGAATACGAGAGCAAATACTTCGAGCATCATGGAGTTCGACTACCTCCCTTCTGCAGGGGCAAGATGGACGAGATCGCCAACTTTTCGTTAAGAAGTAGCGACATATGGATCGTCACATATCCCAAATCAGGTACGAGTTTGCTACAGGAGGTGGTGTATCTGGTGAGTCAGGGGGCGGATCCAGATGAGATCGGGCTCATGAATATTGATGAGCAGCTTCCAGTGCTGGAATACCCACAGCCGGGATTGGAGATTATCCAGGAACTGACATCGCCTCGTCTGATCAAAAGCCACCTGCCGTACCGTTTTCTGCCATCAGCCATGCACAATGGAGAAGGCAAGGTGATTTATATGGCGAGGAACCCTAAAGATCTGGTGGTTTCCTACTACCAGTTTCACCGCTCTCTGAGAACCATGAGCTACAGAGGAACCTTCCAGGAGTTCTGCAGGAGATTCATGAACGACAAACTGGGATACGGCTCCTGGTTTGAGCATGTTCAGGAATTCTGGGAGCATCGCATGGACTCCAATGTTCTCTTTTTGAAATATGAGGACATGTACAAGGATCTGGGCACTCTGGTGGAGCAGCTGGCTCGATTTCTGGGCGTCTCGTGTGATAAAGCCCAGCTGGAGAGCCTGGTGGAGAGCAGTAACCAACTCATCGAGCAGTGCTGCAACTCTGAGGCCCTGTCCATCTGCCGCGGTCGTGTCGGTCTGTGGAAGGACGTTTTCACCGTGTCTATGAATGAAAAGTTTGACGCCATTTACCGCCAGAAGATGGCAAAGTCTGACCTGACCTTTGACTTTATCCTGTAAAGCAGCGACACtggaccaaccaaccaaccagttcACCCACATTGCTTATTAATGTCACCCGACGGACATTTCCTTATGCAGATTTGATCTTTCCATCCCTGCCATCTCTCGCTCATCACTGCTCTTACAATAGTAACTTCTTAATACAGATACGCAGGCTTTTTTTCCCtcttgtgtgtatttgtatgaacAGTGCATCAGCAGTGCTAGTAATGGTGAGCACAGTGCTTGTTGCGTTTGCACATTGTACAGAGCTATTCCATATCCCAAAGGCGCtattgaaaaatgtatttattaaaaatcagAAATGGAAAAAAAGATATATCGACAAACTCAGAGAATATTTCGTCGTCTCAGGAGGATTCTTGAAATCATTGGCTATTAGATTCACCAAATATGCAGTCATCCAATCACAGCTCAGCCGAGCCTCACGATgaatgctgattggctcctggCCAAATATCTTCAAGTGTGTGTGGAATGTCATTTCGCTTTTTTCTTCTTAGTAGCTTTGAATTATAAACTAGAACAGCTATTCACTGAAGcccaattatgttttattttgtacatttattgaaTTATCTATTCATATTTAGATTTGGAAACATTTCTTTAGTCCAGTATAATGTATAAAGGATATTTTGAGAACATTTAGTTCATTTCCTATCATGACCTGATGCTTCAAAAGTGTTGCTATGAGAAGTTCATTTCATTATTATGTCTTGGTCAAACACATAAAAACGCATAAGGTGAACTTAAATACCAGcactcataataacatgacttaTAACCTCACATATCCAACAAATGGCTGCGGCTGCATTCAGAATGGGATACTAGCATACTATATATTATGTTGAATTTAATTCAGGTTAATTTGTAAAGCACTTATTACAATACTTATAGATTCAAAGCAGCTTTTCAAAGGTGCAAATtaatgcattacaatcaaattacgTTCAAGTTAAAATTATATATAGGTTATTATATAAACCTAGTTAACCTGCATtttcatagttgaagtcagaatcatcaTCAAATACATGTTTAATAAAGAAACAGGCAGTTAATTAATGTCTAAAAGCATTTTAGAGATAATGTTGTGTTTCCAGGTTGTTTGATACAAATAAACCAAtctggtttattttgttttcagttttctgCACAGAAAAATTAATTGAATGTATTTTGAATACATTGAATATAGATACATATTCTCAAATGTGCTGACTGCAAAAATAACTTTGGTGGAAAAGCCAGTAGGAAATTCAATATTTAGTGCATTACACTGACAAAAGTGGAGTAAAAACTATTTTCATGTAGAAATTTAGTATATATCACAATTATTTGCAAATGGAAAAGAATACgccaaaataaaatgatataaaagactgtaatagtattttttaaacatacatCAGTGATCTTTAACATCAAGAAATATTACACACTTCAAAATGTACATATACTGTGCACAGTAAAGTATACTACAAAGTAATTATAAACAATTCCTTCATCATTTGTCCatatataatatttacagtaCGCTGGTATGCTATTCTGAATTCAGACATCAGCTCGAATCAGGAAGAGAACTTCTGTTTAAATAGAAGAGATGCTGTGATGTCATAAAGTCTTGAAGCCTCACGTCCAATCAGGAGGCTGCGTCATTACAGTCATTCGGTTTATTCCTCAACAAATCTTCTCTTATTCACAACTATATTAGCCTGATTCCCTGAATGTCTTCACTCAACAGCAAACTCGCAGGCTTGTACTAGTCTGTGCTGTCTTAATGTAAAGCATTGTTATCTCTTCAGTTGTGCTTGCTGGTTTATTAATAAAGTGACATCTTCAGGCCTT

Function

symbol description
sult4a1 Predicted to enable sulfotransferase activity. Predicted to be involved in sulfation. Predicted to be active in cytoplasm. Is expressed in brain. Orthologous to human SULT4A1 (sulfotransferase family 4A member 1).

GO:

id name namespace
GO:0005575 cellular_component cellular_component
GO:0008146 sulfotransferase activity molecular_function
GO:0016740 transferase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060421-2705 Predicted to enable sulfotransferase activity. Predicted to be involved in sulfation. Predicted to be active in cytoplasm. Is expressed in brain. Orthologous to human SULT4A1 (sulfotransferase family 4A member 1).

Ensembl:

ensembl_id ENSDARG00000101967

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00053427 True 2801 mRNA 0.39 7 8797197 8810740

Neighbor

gene id symbol gene type direction distance location
XLOC_027104 adipor2 coding upstream 59311 8670662 ~ 8737886 (+)
XLOC_027105 NA coding upstream 70746 8716125 ~ 8726451 (+)
XLOC_027103 wnt5b coding upstream 134080 8532580 ~ 8663117 (+)
XLOC_027101 ERC1 coding upstream 281373 8213063 ~ 8515824 (+)
XLOC_027102 BX649324.3 coding upstream 293396 8503687 ~ 8503801 (+)
XLOC_027107 NA coding downstream 63825 8874565 ~ 8885723 (+)
XLOC_027108 samm50l coding downstream 200708 9011448 ~ 9025993 (+)
XLOC_027109 aldh1l2 coding downstream 218079 9028819 ~ 9048975 (+)
XLOC_027110 slc41a2b coding downstream 244748 9055488 ~ 9094690 (+)
XLOC_027111 NA coding downstream 296519 9107259 ~ 9148954 (+)
XLOC_027099 CU695020.2 non-coding upstream 662487 8134594 ~ 8134710 (+)
XLOC_027098 NA non-coding upstream 747939 8045442 ~ 8049258 (+)
XLOC_027090 NA non-coding upstream 1079538 7715601 ~ 7717659 (+)
XLOC_027113 NA non-coding downstream 386610 9197350 ~ 9203068 (+)
XLOC_027115 NA non-coding downstream 530087 9340827 ~ 9346703 (+)
XLOC_027116 NA non-coding downstream 536179 9346919 ~ 9352632 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000066_00738687_00750408 MGC115026, ST4A1, SULT4A1, SULT4A1.L coding CI01000066 null 738687 ~ 750740 (+)