G800834


Basic Information

Item Value
gene id G800834
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 38070216 ~ 38071433 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU911426
agacagacagacagacagacagacagacagacagacagacagacacacacacacacacacacacagacagacacacagacagacagacagacagacagacagacagacagacagacagacagacacacagacagacagacacacagacacacagacagacacacacacagacagacacacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacacacagacagacagacacacagacacacagacagacacacagacacacacacacacacagacacacagacacacacacgcacacacacacacacacacacacagacagacagacagacagacagacagacagacagacacacacacagacagacacacagacagacagacagacagacagacacacagacagacagacacacagacacacagacagacacacagacacacacagac
>TU911427
agacagacagacagacagacagacagacagacagacagacagacacacacacacacacacactacatagcctaagcacacgcatgcacacacacacacatgtacgcgcacagacacacacacacagacagacacacagacagacagacagacagacagacagacagacagacagacagacagacacacagacagacacacacacagacagacacacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacacacagacagacagacacacagacacacagacagacacacagacacacacacagacagacacacagacagacagacagacagacagacacacagacagacagacacacagacacacagacagacacacagacacacacagac
>TU911429
agacagacagacagacagacagacagacagacagacagacagacacacacacacacagacacacagacagacacacagacacacacacagacagacacacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacacacagacagacagacacacagacacacagacagacacacagacacacacacagacagacacacagacagacagacagacagacagacacacagacagacagacacacagacacacagacagacacacagacacacacagac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU911426 False 492 lncRNA 0.50 4 38070216 38071433
TU911427 False 434 TUCP 0.50 3 38070216 38071433
TU911429 True 318 lncRNA 0.50 4 38070216 38071433

Neighbor

gene id symbol gene type direction distance location
LOC110532011 LOC106571923 coding upstream 36993 38021681 ~ 38033223 (+)
LOC110532009 LOC106571922 coding upstream 90387 37977424 ~ 37979829 (+)
LOC110532007 LOC106571918 coding upstream 121254 37923872 ~ 37948962 (+)
LOC110532006 LOC106571916 coding upstream 164286 37863680 ~ 37905930 (+)
LOC110532004 LOC106571913 coding upstream 340372 37721066 ~ 37729844 (+)
LOC110532014 LOC106571929 coding downstream 796836 38868269 ~ 38884647 (+)
LOC110532013 LOC106571930 coding downstream 815191 38886624 ~ 38909718 (+)
LOC110532019 LOC106571933 coding downstream 992717 39064150 ~ 39072385 (+)
LOC110531165 LOC106571934 coding downstream 1039922 39111355 ~ 39237408 (+)
LOC110532020 LOC106571937 coding downstream 1168746 39240179 ~ 39256626 (+)
G800826 NA non-coding upstream 14944 38050333 ~ 38055272 (+)
G800789 NA non-coding upstream 80567 37989364 ~ 37989649 (+)
G800776 NA non-coding upstream 97201 37970458 ~ 37973015 (+)
G800727 NA non-coding upstream 149849 37920109 ~ 37920367 (+)
G800705 NA non-coding upstream 162636 37907267 ~ 37907580 (+)
G800996 NA non-coding downstream 263178 38334611 ~ 38337642 (+)
G801490 NA non-coding downstream 458738 38530171 ~ 38530414 (+)
G801496 NA non-coding downstream 463621 38535054 ~ 38535295 (+)
G801511 NA non-coding downstream 472943 38544376 ~ 38545690 (+)
G801513 NA non-coding downstream 475490 38546923 ~ 38547249 (+)
G799858 LOC106571908 other upstream 499805 37567245 ~ 37570411 (+)
G799578 LOC106571900 other upstream 1034298 37034418 ~ 37035918 (+)
G799053 NA other upstream 1753411 36313129 ~ 36316805 (+)
G797932 pphln other upstream 2698068 35364988 ~ 35372148 (+)
G797056 NA other upstream 3513594 34555931 ~ 34556622 (+)
G801778 NA other downstream 716628 38788061 ~ 38788354 (+)
G801851 NA other downstream 861519 38932952 ~ 38933868 (+)
G802324 LOC106571945 other downstream 1344442 39415875 ~ 39417460 (+)

Expression


Co-expression Network