G801653


Basic Information

Item Value
gene id G801653
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 38650318 ~ 38650614 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU912286
tgcaactgctgtgtctgATTTCAACAAAAACGTTACGGaataagcaaaccatgcaataatctgagacggcgctcagaaaaatagTCACAATAGCCACCAtgttggcgtcaacataaacaagaaattacatgataaatattctcttacttttgatgatcttcatcagaaagcactccaggaatcccaggtccacaataaatgtttgttttgttcgataatgtccgttatttatgtccaaatacctccttttgttagtgcgtttgttatacatatccaaacgctcattctggtcagcgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU912286 True 297 lncRNA 0.38 1 38650318 38650614

Neighbor

gene id symbol gene type direction distance location
LOC110532011 LOC106571923 coding upstream 617095 38021681 ~ 38033223 (+)
LOC110532009 LOC106571922 coding upstream 670489 37977424 ~ 37979829 (+)
LOC110532007 LOC106571918 coding upstream 701356 37923872 ~ 37948962 (+)
LOC110532006 LOC106571916 coding upstream 744388 37863680 ~ 37905930 (+)
LOC110532004 LOC106571913 coding upstream 920474 37721066 ~ 37729844 (+)
LOC110532014 LOC106571929 coding downstream 217655 38868269 ~ 38884647 (+)
LOC110532013 LOC106571930 coding downstream 236010 38886624 ~ 38909718 (+)
LOC110532019 LOC106571933 coding downstream 413536 39064150 ~ 39072385 (+)
LOC110531165 LOC106571934 coding downstream 460741 39111355 ~ 39237408 (+)
LOC110532020 LOC106571937 coding downstream 589565 39240179 ~ 39256626 (+)
G801646 NA non-coding upstream 6161 38643945 ~ 38644157 (+)
G801641 NA non-coding upstream 10872 38639141 ~ 38639446 (+)
G801636 NA non-coding upstream 12876 38637201 ~ 38637442 (+)
G801633 NA non-coding upstream 14395 38635602 ~ 38635923 (+)
G801525 NA non-coding upstream 94531 38555546 ~ 38555787 (+)
G801657 NA non-coding downstream 1919 38652533 ~ 38653370 (+)
G801706 NA non-coding downstream 32513 38683127 ~ 38683476 (+)
G801744 NA non-coding downstream 88737 38739351 ~ 38739779 (+)
G801756 NA non-coding downstream 105009 38755623 ~ 38782086 (+)
G801781 NA non-coding downstream 140276 38790890 ~ 38791204 (+)
G800834 NA other upstream 578885 38070216 ~ 38071433 (+)
G799858 LOC106571908 other upstream 1079907 37567245 ~ 37570411 (+)
G799578 LOC106571900 other upstream 1614400 37034418 ~ 37035918 (+)
G799053 NA other upstream 2333513 36313129 ~ 36316805 (+)
G797932 pphln other upstream 3278170 35364988 ~ 35372148 (+)
G801778 NA other downstream 137447 38788061 ~ 38788354 (+)
G801851 NA other downstream 282338 38932952 ~ 38933868 (+)
G802324 LOC106571945 other downstream 765261 39415875 ~ 39417460 (+)

Expression


Co-expression Network