Gene
RNA
| Item | Value |
|---|---|
| gene id | G801667 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 38658396 ~ 38658623 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| transposase-like, partial |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU912300 | True | 228 | lncRNA | 0.47 | 1 | 38658396 | 38658623 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110532016 | NA | coding | downstream | 110349 | 38545204 ~ 38548047 (-) |
| LOC110532012 | cdh4 | coding | downstream | 217566 | 38052715 ~ 38440830 (-) |
| LOC110532008 | LOC106571920 | coding | downstream | 681047 | 37961139 ~ 37977349 (-) |
| LOC110531163 | LOC102784363 | coding | downstream | 697009 | 37953610 ~ 37961387 (-) |
| LOC110531162 | LOC106571919 | coding | downstream | 705186 | 37948740 ~ 37953210 (-) |
| LOC110532015 | LOC106566767 | coding | upstream | 180642 | 38839265 ~ 38841685 (-) |
| LOC110532017 | LOC106571931 | coding | upstream | 337888 | 38996511 ~ 39019461 (-) |
| LOC110532021 | LOC106571935 | coding | upstream | 599865 | 39258488 ~ 39261833 (-) |
| LOC110532022 | LOC106571939 | coding | upstream | 608702 | 39267325 ~ 39270815 (-) |
| baz2a | LOC106571938 | coding | upstream | 614199 | 39272822 ~ 39315559 (-) |
| G801656 | NA | non-coding | downstream | 6508 | 38651588 ~ 38651888 (-) |
| G801655 | NA | non-coding | downstream | 7305 | 38650875 ~ 38651091 (-) |
| G801654 | NA | non-coding | downstream | 7719 | 38650350 ~ 38650677 (-) |
| G801515 | NA | non-coding | downstream | 113652 | 38544466 ~ 38544744 (-) |
| G801509 | NA | non-coding | downstream | 114856 | 38543101 ~ 38543540 (-) |
| G801671 | NA | non-coding | upstream | 988 | 38659611 ~ 38659842 (-) |
| G801692 | NA | non-coding | upstream | 13077 | 38671700 ~ 38673271 (-) |
| G801956 | NA | non-coding | upstream | 55989 | 38714612 ~ 38714853 (-) |
| G801999 | NA | non-coding | upstream | 125476 | 38784099 ~ 38784308 (-) |
| G802000 | NA | non-coding | upstream | 125866 | 38784489 ~ 38784710 (-) |
| G800318 | NA | other | downstream | 1313249 | 37344395 ~ 37345147 (-) |
| LOC110531982 | LOC106571893 | other | downstream | 1750748 | 36827882 ~ 36907700 (-) |
| G798993 | NA | other | downstream | 2507759 | 36150338 ~ 36150637 (-) |
| LOC110531979 | brpf1 | other | downstream | 2679281 | 35948544 ~ 35979307 (-) |
| LOC118966032 | LOC106571870 | other | downstream | 3137064 | 35492026 ~ 35521884 (-) |
| G802100 | NA | other | upstream | 307833 | 38966456 ~ 38996032 (-) |
| G802138 | NA | other | upstream | 391907 | 39050530 ~ 39061381 (-) |
| G802149 | LOC106581475 | other | upstream | 415858 | 39074481 ~ 39074720 (-) |
| G802602 | LOC106571943 | other | upstream | 722127 | 39380750 ~ 39383210 (-) |
