G801706


Basic Information

Item Value
gene id G801706
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 38683127 ~ 38683476 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU912341
ggaaaaaattgtgtttgaccaaatacaatgctatttctccgtaaacaaattaacaacagactttcagcatgcttatagagaagggcactcaacatctactgcactgacacaaatgactgatgattggttgaaataaattgataataagaagatagtgggagctgtactgttagatttcagtgcagcctttcatattattgaccataacttgttgttgagaaaacgtatgtgttatagcttttcaacctctgccatattggggattcagagctatctatctaatagaactcaaagggttttctttaatggaagcttctctaatgtcaaacatgtaaagtgtggtgtaccgc

Function

NR:

description
uncharacterized protein LOC106676187

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU912341 True 350 lncRNA 0.36 1 38683127 38683476

Neighbor

gene id symbol gene type direction distance location
LOC110532011 LOC106571923 coding upstream 649904 38021681 ~ 38033223 (+)
LOC110532009 LOC106571922 coding upstream 703298 37977424 ~ 37979829 (+)
LOC110532007 LOC106571918 coding upstream 734165 37923872 ~ 37948962 (+)
LOC110532006 LOC106571916 coding upstream 777197 37863680 ~ 37905930 (+)
LOC110532004 LOC106571913 coding upstream 953283 37721066 ~ 37729844 (+)
LOC110532014 LOC106571929 coding downstream 184793 38868269 ~ 38884647 (+)
LOC110532013 LOC106571930 coding downstream 203148 38886624 ~ 38909718 (+)
LOC110532019 LOC106571933 coding downstream 380674 39064150 ~ 39072385 (+)
LOC110531165 LOC106571934 coding downstream 427879 39111355 ~ 39237408 (+)
LOC110532020 LOC106571937 coding downstream 556703 39240179 ~ 39256626 (+)
G801657 NA non-coding upstream 29757 38652533 ~ 38653370 (+)
G801653 NA non-coding upstream 32513 38650318 ~ 38650614 (+)
G801646 NA non-coding upstream 38970 38643945 ~ 38644157 (+)
G801641 NA non-coding upstream 43681 38639141 ~ 38639446 (+)
G801636 NA non-coding upstream 45685 38637201 ~ 38637442 (+)
G801744 NA non-coding downstream 55875 38739351 ~ 38739779 (+)
G801756 NA non-coding downstream 72147 38755623 ~ 38782086 (+)
G801781 NA non-coding downstream 107414 38790890 ~ 38791204 (+)
G801789 LOC100194703 non-coding downstream 117400 38800876 ~ 38801090 (+)
G801822 NA non-coding downstream 173572 38857048 ~ 38857447 (+)
G800834 NA other upstream 611694 38070216 ~ 38071433 (+)
G799858 LOC106571908 other upstream 1112716 37567245 ~ 37570411 (+)
G799578 LOC106571900 other upstream 1647209 37034418 ~ 37035918 (+)
G799053 NA other upstream 2366322 36313129 ~ 36316805 (+)
G797932 pphln other upstream 3310979 35364988 ~ 35372148 (+)
G801778 NA other downstream 104585 38788061 ~ 38788354 (+)
G801851 NA other downstream 249476 38932952 ~ 38933868 (+)
G802324 LOC106571945 other downstream 732399 39415875 ~ 39417460 (+)

Expression


Co-expression Network