G801789 (LOC100194703)


Basic Information

Item Value
gene id G801789
gene name LOC100194703
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 38800876 ~ 38801090 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU912425
cttgaggattgaccacaagttctcaatgggattaaggtctggggagtttcctggccatggacccaaaatatagatgttttgttccccgggcCACTTAggtatcacttttgccttatggtaaggtgctccatcatgctggaaaaggcattgttcatcaccaaactgttcctggatggttgagaGATGTTACTTTCGGAGAATGTGTTGGTTCCact

Function

NR:

description
transposase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU912425 True 215 lncRNA 0.46 1 38800876 38801090

Neighbor

gene id symbol gene type direction distance location
LOC110532011 LOC106571923 coding upstream 767653 38021681 ~ 38033223 (+)
LOC110532009 LOC106571922 coding upstream 821047 37977424 ~ 37979829 (+)
LOC110532007 LOC106571918 coding upstream 851914 37923872 ~ 37948962 (+)
LOC110532006 LOC106571916 coding upstream 894946 37863680 ~ 37905930 (+)
LOC110532004 LOC106571913 coding upstream 1071032 37721066 ~ 37729844 (+)
LOC110532014 LOC106571929 coding downstream 67179 38868269 ~ 38884647 (+)
LOC110532013 LOC106571930 coding downstream 85534 38886624 ~ 38909718 (+)
LOC110532019 LOC106571933 coding downstream 263060 39064150 ~ 39072385 (+)
LOC110531165 LOC106571934 coding downstream 310265 39111355 ~ 39237408 (+)
LOC110532020 LOC106571937 coding downstream 439089 39240179 ~ 39256626 (+)
G801781 NA non-coding upstream 9672 38790890 ~ 38791204 (+)
G801756 NA non-coding upstream 18790 38755623 ~ 38782086 (+)
G801744 NA non-coding upstream 61097 38739351 ~ 38739779 (+)
G801706 NA non-coding upstream 117400 38683127 ~ 38683476 (+)
G801657 NA non-coding upstream 147506 38652533 ~ 38653370 (+)
G801822 NA non-coding downstream 55958 38857048 ~ 38857447 (+)
G801824 NA non-coding downstream 57632 38858722 ~ 38858946 (+)
G801849 NA non-coding downstream 128453 38929543 ~ 38929891 (+)
G801850 NA non-coding downstream 129797 38930887 ~ 38931221 (+)
G801854 NA non-coding downstream 154743 38955833 ~ 38956104 (+)
G801778 NA other upstream 12522 38788061 ~ 38788354 (+)
G800834 NA other upstream 729443 38070216 ~ 38071433 (+)
G799858 LOC106571908 other upstream 1230465 37567245 ~ 37570411 (+)
G799578 LOC106571900 other upstream 1764958 37034418 ~ 37035918 (+)
G799053 NA other upstream 2484071 36313129 ~ 36316805 (+)
G801851 NA other downstream 131862 38932952 ~ 38933868 (+)
G802324 LOC106571945 other downstream 614785 39415875 ~ 39417460 (+)
adcy6a LOC106566714 other downstream 664883 39465931 ~ 39513879 (+)

Expression


Co-expression Network