G801849


Basic Information

Item Value
gene id G801849
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 38929543 ~ 38929891 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU912487
CAAATGTTAcctacaagaccttaaccaacaatgctttaagaagttaagaaaaaaattGAAAAGAAAATAgattaacaaataattaaacagcagcaatATAATAacaagtgaggctatatacacagggggtagtggtatagagtcaatgtgcgggggcaccggttagttgaggtaatatgtacatgtaggtagagttaaagtgactatgcatagataataaacagagagtagcagcagcgtaaaagaggggtctgggtagcctgttgattagctgttcagcagtcttatggcttgggggtagaagctgttaagaagccttttggaccttgaCTTGGCGCCAGTGATGTAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU912487 True 349 lncRNA 0.40 1 38929543 38929891

Neighbor

gene id symbol gene type direction distance location
LOC110532013 LOC106571930 coding upstream 19825 38886624 ~ 38909718 (+)
LOC110532014 LOC106571929 coding upstream 44896 38868269 ~ 38884647 (+)
LOC110532011 LOC106571923 coding upstream 896320 38021681 ~ 38033223 (+)
LOC110532009 LOC106571922 coding upstream 949714 37977424 ~ 37979829 (+)
LOC110532007 LOC106571918 coding upstream 980581 37923872 ~ 37948962 (+)
LOC110532019 LOC106571933 coding downstream 134259 39064150 ~ 39072385 (+)
LOC110531165 LOC106571934 coding downstream 181464 39111355 ~ 39237408 (+)
LOC110532020 LOC106571937 coding downstream 310288 39240179 ~ 39256626 (+)
LOC110532026 LOC106571943 coding downstream 445477 39375368 ~ 39383225 (+)
ddx23 LOC106571944 coding downstream 471144 39401035 ~ 39411199 (+)
G801824 NA non-coding upstream 70597 38858722 ~ 38858946 (+)
G801822 NA non-coding upstream 72096 38857048 ~ 38857447 (+)
G801789 LOC100194703 non-coding upstream 128453 38800876 ~ 38801090 (+)
G801781 NA non-coding upstream 138339 38790890 ~ 38791204 (+)
G801756 NA non-coding upstream 147457 38755623 ~ 38782086 (+)
G801850 NA non-coding downstream 996 38930887 ~ 38931221 (+)
G801854 NA non-coding downstream 25942 38955833 ~ 38956104 (+)
G801903 NA non-coding downstream 91685 39021576 ~ 39021831 (+)
G801905 NA non-coding downstream 94009 39023900 ~ 39024254 (+)
G801907 NA non-coding downstream 96024 39025915 ~ 39026386 (+)
G801778 NA other upstream 141189 38788061 ~ 38788354 (+)
G800834 NA other upstream 858110 38070216 ~ 38071433 (+)
G799858 LOC106571908 other upstream 1359132 37567245 ~ 37570411 (+)
G799578 LOC106571900 other upstream 1893625 37034418 ~ 37035918 (+)
G799053 NA other upstream 2612738 36313129 ~ 36316805 (+)
G801851 NA other downstream 3061 38932952 ~ 38933868 (+)
G802324 LOC106571945 other downstream 485984 39415875 ~ 39417460 (+)
adcy6a LOC106566714 other downstream 536082 39465931 ~ 39513879 (+)

Expression


Co-expression Network