G802158


Basic Information

Item Value
gene id G802158
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 39087611 ~ 39087840 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU912830
tacaagcccttaaccaacagtgtagttcaagaagaaaatattcaccaagtagactaaaataaaaagtaacacaataagaataaccataacgaggctgtatacagggggcaccggtaccgagtcagtgtgcaggggtacaggctagttgaggcaatctgtacatgtaggtaggggtgaagtgactatgcatagataataaacaacagcaagtagcagcagtgtacaaaagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU912830 True 230 lncRNA 0.42 1 39087611 39087840

Neighbor

gene id symbol gene type direction distance location
LOC110532019 LOC106571933 coding upstream 15226 39064150 ~ 39072385 (+)
LOC110532013 LOC106571930 coding upstream 177893 38886624 ~ 38909718 (+)
LOC110532014 LOC106571929 coding upstream 202964 38868269 ~ 38884647 (+)
LOC110532011 LOC106571923 coding upstream 1054388 38021681 ~ 38033223 (+)
LOC110532009 LOC106571922 coding upstream 1107782 37977424 ~ 37979829 (+)
LOC110531165 LOC106571934 coding downstream 23515 39111355 ~ 39237408 (+)
LOC110532020 LOC106571937 coding downstream 152339 39240179 ~ 39256626 (+)
LOC110532026 LOC106571943 coding downstream 287528 39375368 ~ 39383225 (+)
ddx23 LOC106571944 coding downstream 313195 39401035 ~ 39411199 (+)
adcy6a LOC106566714 coding downstream 378091 39465931 ~ 39513879 (+)
G801927 LOC106581475 non-coding upstream 12896 39074471 ~ 39074715 (+)
G801924 NA non-coding upstream 13509 39073675 ~ 39074102 (+)
G801920 NA non-coding upstream 42463 39044898 ~ 39045148 (+)
G801915 NA non-coding upstream 50368 39036987 ~ 39037243 (+)
G801913 NA non-coding upstream 51896 39035409 ~ 39035715 (+)
G802169 NA non-coding downstream 9654 39097494 ~ 39097781 (+)
G802222 NA non-coding downstream 119697 39207537 ~ 39207784 (+)
G802231 NA non-coding downstream 127471 39215311 ~ 39216363 (+)
G802241 NA non-coding downstream 170568 39258408 ~ 39259969 (+)
G801851 NA other upstream 153743 38932952 ~ 38933868 (+)
G801778 NA other upstream 299257 38788061 ~ 38788354 (+)
G800834 NA other upstream 1016178 38070216 ~ 38071433 (+)
G799858 LOC106571908 other upstream 1517200 37567245 ~ 37570411 (+)
G802324 LOC106571945 other downstream 328035 39415875 ~ 39417460 (+)
spryd4 LOC106571951 other downstream 551414 39639241 ~ 39640889 (+)
G802821 NA other downstream 701817 39789657 ~ 39790402 (+)

Expression


Co-expression Network