G802222


Basic Information

Item Value
gene id G802222
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 39207537 ~ 39207784 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU912909
GTGTGGTTCTCCTCCTGATCGTGCACTGCATCcccCTTCCAcgccttctctcactctcttccctcctctccctcttgctcCCTCCCCTTCACTACACttttccatctcccctctctgcttccctctctcctctcctctgtttccacTGCTTGGGACTCCCTAAAAACACACCGCTCCGACCACAAGTGACTTTTTGTAGCCTTAACCTAATACTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU912909 True 216 lncRNA 0.54 2 39207537 39207784

Neighbor

gene id symbol gene type direction distance location
LOC110532019 LOC106571933 coding upstream 135152 39064150 ~ 39072385 (+)
LOC110532013 LOC106571930 coding upstream 297819 38886624 ~ 38909718 (+)
LOC110532014 LOC106571929 coding upstream 322890 38868269 ~ 38884647 (+)
LOC110532011 LOC106571923 coding upstream 1174314 38021681 ~ 38033223 (+)
LOC110532009 LOC106571922 coding upstream 1227708 37977424 ~ 37979829 (+)
LOC110532020 LOC106571937 coding downstream 32395 39240179 ~ 39256626 (+)
LOC110532026 LOC106571943 coding downstream 167584 39375368 ~ 39383225 (+)
ddx23 LOC106571944 coding downstream 193251 39401035 ~ 39411199 (+)
adcy6a LOC106566714 coding downstream 258147 39465931 ~ 39513879 (+)
LOC110532032 NA coding downstream 293469 39501253 ~ 39503641 (+)
G802169 NA non-coding upstream 109756 39097494 ~ 39097781 (+)
G802158 NA non-coding upstream 119697 39087611 ~ 39087840 (+)
G801927 LOC106581475 non-coding upstream 132822 39074471 ~ 39074715 (+)
G801924 NA non-coding upstream 133435 39073675 ~ 39074102 (+)
G801920 NA non-coding upstream 162389 39044898 ~ 39045148 (+)
G802231 NA non-coding downstream 7527 39215311 ~ 39216363 (+)
LOC110531165 LOC106571934 non-coding downstream 20851 39111355 ~ 39237408 (+)
G802241 NA non-coding downstream 50624 39258408 ~ 39259969 (+)
G802292 NA non-coding downstream 114832 39322616 ~ 39322837 (+)
G802191 NA non-coding downstream 118246 39326030 ~ 39384896 (+)
G801851 NA other upstream 273669 38932952 ~ 38933868 (+)
G801778 NA other upstream 419183 38788061 ~ 38788354 (+)
G800834 NA other upstream 1136104 38070216 ~ 38071433 (+)
G799858 LOC106571908 other upstream 1637126 37567245 ~ 37570411 (+)
G802324 LOC106571945 other downstream 208091 39415875 ~ 39417460 (+)
spryd4 LOC106571951 other downstream 431470 39639241 ~ 39640889 (+)
G802821 NA other downstream 581873 39789657 ~ 39790402 (+)

Expression


Co-expression Network